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BaseInfo

ncRNA ID	novel_gma_miR1635
Species	Glycine max
Class	miRNA
Genome position	Chr17:18934022-18934103 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451648;SRR1451604;SRR1451610
Length	24
Mature sequence(if miRNA)	59 - GACCGAUGUAGAAUGCUGAGCAUU - 82
Stem-loop(if miRNA)	--  C            C   G               UUUC   GA CGAUGUAGAAUG UGA CAUUCUAAGAUGAUC    A   || |||||||||||| ||| |||||||||||||||   CU GCUACAUCUUAC ACU GUAAGAUUCUGCUAG    C UU  A            A   A               UGCA
Stem-loop sequence	GACCGAUGUAGAAUGCUGAGCAUUCUAAGAUGAUCUUUCACACGUGAUCGUCUUAGAAUGAUCAACAUUCUACAUCGAUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006598094.2	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   |||||*=||||||||||||||||| targets:928   AAUGCAUAGCAUUCUACAUCGGUC   951 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768221.1	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   |||||*=||||||||||||||||| targets:1041   AAUGCAUAGCAUUCUACAUCGGUC   1064 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768217.1	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   |||||*=||||||||||||||||| targets:1201   AAUGCAUAGCAUUCUACAUCGGUC   1224 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768216.1	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   |||||*=||||||||||||||||| targets:1478   AAUGCAUAGCAUUCUACAUCGGUC   1501 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768212.1	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   |||||*=||||||||||||||||| targets:1641   AAUGCAUAGCAUUCUACAUCGGUC   1664 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014767461.1	ncRNA:24   UUACGAGUCGUAAGAUGUAGCCAG   1   ||||*|||*|||||*||||||||| targets:585   AAUGAUCAUCAUUCAACAUCGGUC   608 Target Full Sequence	2.5	PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA	putative dual specificity protein phosphatase DSP8(LOC100787468)	coding protein	psRNATarget
XM_003539359.3	ncRNA:24   UUACGAGU-CGUAAGAUGUAGCCAG   1   ||*|-|||-|||||||||||||||= targets:2798   AAAG-UCAUGCAUUCUACAUCGGUU   2821 Target Full Sequence	3.0	PREDICTED: Glycine max MLO-like protein 6 (LOC100776714), mRNA	MLO-like protein 6(LOC100776714)	coding protein	psRNATarget