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BaseInfo

ncRNA ID novel_gma_miR1632
Species Glycine max
Class miRNA
Genome position Chr17:5843617-5843699 [+]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 21
Mature sequence(if miRNA) 1 - UCAGCAUUCAUUUUCUUGGAC - 21
Stem-loop(if miRNA) --   G                C   -----AAUA      AUU
  UCA CAUUCAUUUUCUUGGA UCU         GAUAAG   A
  ||| |||||||||||||||| |||         ||||||
  AGU GUAAGUAAAAGAACCU AGA         UUAUUC   G
GG   G                U   AAACCAAUA      AGU
Stem-loop sequence UCAGCAUUCAUUUUCUUGGACUCUAAUAGAUAAGAUUAGUGACUUAUUAUAACCAAAAGAUUCCAAGAAAAUGAAUGGUGAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535089.3
ncRNA:21   CAGGUUCUUUUACUUACGACU   1
  **|||||||||||||*||||=
targets:578   UACCAAGAAAAUGAAGGCUGG   598

2.5 PREDICTED: Glycine max B3 domain-containing transcription factor VRN1-like (LOC100815331), mRNA B3 domain-containing transcription factor VRN1-like(LOC100815331) coding protein psRNATarget