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BaseInfo

ncRNA ID	novel_gma_miR1630
Species	Glycine max
Class	miRNA
Genome position	Chr17:31735611-31735790 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451648
Length	22
Mature sequence(if miRNA)	159 - CUAUAAGUGCUUAUGGAGAUGU - 180
Stem-loop(if miRNA)	--      U           C  ------               G     A  C          ---       A  C  C          AAA   GUCUCC UAAGCAUUUAU GU      GGAAGAAAAUAAGAA GUAAG UG AUUGAGCUUC   CAUGAGC AA AU AGCUUAUGUA   U   |||||| ||||||||||| ||      ||||||||||||||| ||||| || ||||||||||   ||||||| || || ||||||||||   U   UAGAGG AUUCGUGAAUA CG      UCUUCUUUUAUUUUU UAUUU AC UAAUUCGAAG   GUAUUCG UU UA UUGAAUACAU   C UG      U           U  GUAUCC               A     C  U          AAA       A  U  U          GAA
Stem-loop sequence	GUCUCCUUAAGCAUUUAUCGUGGAAGAAAAUAAGAAGGUAAGAUGCAUUGAGCUUCCAUGAGCAAACAUCAGCUUAUGUAAAAUUCAAGUACAUAAGUUUAUUUUAGCUUAUGAAAGAAGCUUAAUUCACUUUAUAUUUUUAUUUUCUUCUCCUAUGGCUAUAAGUGCUUAUGGAGAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014764118.1	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   |=*|||=||||||||||||||| targets:902   AUUUCUUCAUAAGCACUUAUAG   923 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100779185 (LOC100779185), transcript variant X3, mRNA	uncharacterized LOC100779185(LOC100779185)	coding protein	psRNATarget
BT094177.1	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*||||*|||||||||||||| targets:109   ACUUCUCAAUAAGCACUUAUAG   130 Target Full Sequence	1.0	Soybean clone JCVI-FLGm-14B17 unknown mRNA	NA	coding protein	psRNATarget
XM_014765747.1	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*||||*|||||||||||||| targets:690   ACUUCUCAAUAAGCACUUAUAG   711 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100781365 (LOC100781365), transcript variant X5, mRNA	uncharacterized LOC100781365(LOC100781365)	coding protein	psRNATarget
XM_014769360.1	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*|||||||||*||||||||* targets:1495   ACUUCUCCAUAAUCACUUAUAA   1516 Target Full Sequence	2.5	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X5, mRNA	protein IQ-DOMAIN 1-like(LOC100809448)	coding protein	psRNATarget
XM_014769359.1	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*|||||||||*||||||||* targets:1518   ACUUCUCCAUAAUCACUUAUAA   1539 Target Full Sequence	2.5	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X3, mRNA	protein IQ-DOMAIN 1-like(LOC100809448)	coding protein	psRNATarget
XM_006600966.2	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*|||||||||*||||||||* targets:1521   ACUUCUCCAUAAUCACUUAUAA   1542 Target Full Sequence	2.5	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X4, mRNA	protein IQ-DOMAIN 1-like(LOC100809448)	coding protein	psRNATarget
XM_014769358.1	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*|||||||||*||||||||* targets:1525   ACUUCUCCAUAAUCACUUAUAA   1546 Target Full Sequence	2.5	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X2, mRNA	protein IQ-DOMAIN 1-like(LOC100809448)	coding protein	psRNATarget
XM_006600967.2	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*|||||||||*||||||||* targets:1644   ACUUCUCCAUAAUCACUUAUAA   1665 Target Full Sequence	2.5	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X6, mRNA	protein IQ-DOMAIN 1-like(LOC100809448)	coding protein	psRNATarget
XM_006600963.2	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*|||||||||*||||||||* targets:1649   ACUUCUCCAUAAUCACUUAUAA   1670 Target Full Sequence	2.5	PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100809448), transcript variant X1, mRNA	protein IQ-DOMAIN 1-like(LOC100809448)	coding protein	psRNATarget
XM_014779022.1	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*||||*|||||||||||*|| targets:508   ACUUCUCAAUAAGCACUUACAG   529 Target Full Sequence	2.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X4, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779020.1	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*||||*|||||||||||*|| targets:594   ACUUCUCAAUAAGCACUUACAG   615 Target Full Sequence	2.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X2, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779021.1	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*||||*|||||||||||*|| targets:618   ACUUCUCAAUAAGCACUUACAG   639 Target Full Sequence	2.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X3, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget
XM_014779019.1	ncRNA:22   UGUAGAGGUAUUCGUGAAUAUC   1   ||*||||*|||||||||||*|| targets:704   ACUUCUCAAUAAGCACUUACAG   725 Target Full Sequence	2.5	PREDICTED: Glycine max cysteine synthase-like (LOC100796465), transcript variant X1, mRNA	cysteine synthase-like(LOC100796465)	coding protein	psRNATarget