ncRNA ID | novel_gma_miR1629 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:30903447-30903667 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451648 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGAUUAUUGUUGUAGGGUAGA - 21 |
Stem-loop(if miRNA) |
--                  A                                                                 U              --      UA   UGAUUAUUGUUGUAGGGU GAUGACUUAGAGGUUAGAAGACUUAGGAAUUUCUGGAAUAGGAUUAGGGUUCAUACAUACGGAUG ACUUCAUCUGUAUG  UGUUAC  A   |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||  A   ACUAAUAACAACAUCCCA CUACUGAAUCUCCAAUCUUCUGAAUCCUUAAAGACCUUAUCCUAAUCCCAAGUAUGUAUGCCUAC UGAAGUAGGCAUAC  GCAAUG  U CA                  A                                                                 U              UU      UU |
Stem-loop sequence | UGAUUAUUGUUGUAGGGUAGAUGACUUAGAGGUUAGAAGACUUAGGAAUUUCUGGAAUAGGAUUAGGGUUCAUACAUACGGAUGUACUUCAUCUGUAUGUGUUACUAAAUUUGUAACGUUCAUACGGAUGAAGUUCAUCCGUAUGUAUGAACCCUAAUCCUAUUCCAGAAAUUCCUAAGUCUUCUAACCUCUAAGUCAUCAACCCUACAACAAUAAUCAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT096392.1 |
|
2.5 | Soybean clone JCVI-FLGm-9D16 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001317478.1 |
|
2.5 | Glycine max uncharacterized LOC100789560 (LOC100789560), mRNA | uncharacterized LOC100789560(LOC100789560) | coding protein | psRNATarget |