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BaseInfo

ncRNA ID	novel_gma_miR1627
Species	Glycine max
Class	miRNA
Genome position	Chr8:22686581-22686779 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294480;SRR1294485;SRR1295516;SRR1295519;SRR1295524
Length	24
Mature sequence(if miRNA)	1 - AAGAGGAAAGAACGAAGAAGAAGU - 24
Stem-loop(if miRNA)	--             A     G    C    C     A   C   UA      C     U    GU     CA      -     C A    C      G   UUCUUCUUCGUUC UUCUU UUUU UUUU UUCGU UAG CUA  GAUUGA AAUCC UAAG  CAAUC  UAUGGG CCAUA G AUUG CAAUUU U   ||||||||||||| ||||| |||| |||| ||||| ||| |||  |||||| ||||| ||||  |||||  |||||| ||||| | |||| ||||||   AAGAAGAAGCAAG AAGGA AAGA AAAA AAGUA AUC GAU  CUAACU UUAGG AUUU  GUUAG  AUACCU GGUAU U UAAC GUUGGG A UG             A     G    A    A     A   C   GC      A     U    UG     UC      A     A C    U      U
Stem-loop sequence	UUCUUCUUCGUUCAUUCUUGUUUUCUUUUCUUCGUAUAGCCUAUAGAUUGACAAUCCUUAAGGUCAAUCCAUAUGGGCCAUACGAAUUGCCAAUUUGUAUGGGUUGUCAAUCUAUAUGGAUCCAUACUGAUUGGUUUUAUGGAUUAUCAAUCCGUAGCCUAAAUGAAAAAAAAAGAAGAGGAAAGAACGAAGAAGAAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006592905.2	ncRNA:24   UGAAGAAGAAGCAAGAAAGGAGAA   1   *|||=||||||||||*|||||||| targets:1740   UCUUUUUCUUCGUUCGUUCCUCUU   1763 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100783695 (LOC100783695), transcript variant X6, mRNA	uncharacterized LOC100783695(LOC100783695)	coding protein	psRNATarget
XM_006592899.2	ncRNA:24   UGAAGAAGAAGCAAGAAAGGAGAA   1   *|||=||||||||||*|||||||| targets:1671   UCUUUUUCUUCGUUCGUUCCUCUU   1694 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100783695 (LOC100783695), transcript variant X1, mRNA	uncharacterized LOC100783695(LOC100783695)	coding protein	psRNATarget
XM_006587430.2	ncRNA:24   UGAAGAAGAAGCAAGAAAGGAGAA   1   =||*=||||||||||||||||=|| targets:101   GCUAUUUCUUCGUUCUUUCCUUUU   124 Target Full Sequence	1.5	PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At5g48740 (LOC100776297), transcript variant X1, mRNA	probable LRR receptor-like serine/threonine-protein kinase At5g48740(LOC100776297)	coding protein	psRNATarget
XM_006587431.2	ncRNA:24   UGAAGAAGAAGCAAGAAAGGAGAA   1   =||*=||||||||||||||||=|| targets:101   GCUAUUUCUUCGUUCUUUCCUUUU   124 Target Full Sequence	1.5	PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At5g48740 (LOC100776297), transcript variant X3, mRNA	probable LRR receptor-like serine/threonine-protein kinase At5g48740(LOC100776297)	coding protein	psRNATarget
XM_003545099.3	ncRNA:24   UGAAGAAGAAGCAAGAAAGGAGAA   1   *|||||*||||*|||||||||||| targets:81   CCUUCUCCUUCUUUCUUUCCUCUU   104 Target Full Sequence	2.5	PREDICTED: Glycine max probable sucrose-phosphate synthase 3 (LOC100806543), mRNA	probable sucrose-phosphate synthase 3(LOC100806543)	coding protein	psRNATarget