| ncRNA ID | bra-miR5713 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | chrA9:34116461-34116906 [+] |
| Reference genome | Brapa_1.1 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 76 - AGGCUUAGAAGAACGUUUGUU - 96 |
| Stem-loop(if miRNA) |
AUAA C U --U C ---- --- ACCCAGUCACAGCGGAAGGGUUCUUAAGGAUUCAUAACUGUUUUGUCAAGGGUUCAGAAUGUUUUUUUGGGGAAAUGAUAGGGUUUACAAUGGCAA GCAGAGUUACUCUAGG AAU AUCUUCCUCCGAUUGAAAUUUGCAGACCAGUUGGACUACCGGAGCUAGGUAGGCUUAGAAGAACGUUUGUUAAAUU GCAGA CA GUUA UGACUGUGAU A |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||||||||| UGUCUCAAUGAGAUCC UUA UAGAAGGAGGCUAACUUUAAACGUCUGGUCAACCUGAUGGCCUCGAUCCAUCCGAAUCUUCUUGCAAACAAUUUAA CCCAG UC CAGA GCCCGGUGGC A ---- A C CUA - AGCU CUC AAUGGUUGACUACGUUUGUCACCUUUCUCUGCCAAACACCUAAUGAACUUGUCUCUCAAAUCUCCAUUAUUGCGAACUUACGUAGUAGAGAGGAUU |
| Stem-loop sequence | AUAAGCAGAGUUACUCUAGGCAAUUAUCUUCCUCCGAUUGAAAUUUGCAGACCAGUUGGACUACCGGAGCUAGGUAGGCUUAGAAGAACGUUUGUUAAAUUUGCAGACCAGUUAUGACUGUGAUACCCAGUCACAGCGGAAGGGUUCUUAAGGAUUCAUAACUGUUUUGUCAAGGGUUCAGAAUGUUUUUUUGGGGAAAUGAUAGGGUUUACAAUGGCAAAAUUAGGAGAGAUGAUGCAUUCAAGCGUUAUUACCUCUAAACUCUCUGUUCAAGUAAUCCACAAACCGUCUCUUUCCACUGUUUGCAUCAGUUGGUAACGGUGGCCCGCUCAGACUCGACUGACCCAUCAAUUUAACAAACGUUCUUCUAAGCCUACCUAGCUCCGGUAGUCCAACUGGUCUGCAAAUUUCAAUCGGAGGAAGAUCAUUACCUAGAGUAACUCUGU |
| 1 | PMID:22025521
"Identification of conserved and novel microRNAs that are responsive to heat stress in Brassica rapa"; Yu X, Wang H, Lu Y, de Ruiter M, Cariaso M, Prins M, van Tunen A, He Y; J Exp Bot. 63:1025-1038(2012). |