ncRNA ID | bra-miR156f-3p |
Species | Brassica rapa |
Class | miRNA |
Genome position | chrA9:31078747-31078923 [+] |
Reference genome | Brapa_1.1 |
Source | miRBase |
Length | 23 |
Mature sequence(if miRNA) | 102 - UGCUCACUGCUCUUUCUGUCAGA - 124 |
Stem-loop(if miRNA) |
UUGUGAGUGAAU   -          -  A    --C    AAA  -- ACAGAAGAGAGUGAGCACACAAAAGUAAAUUGCAUAUGUUGCAUUUGC             GAG CUGGGGCAAA AG AACA   ACAG   CU  G                                                U             ||| |||||||||| || ||||   ||||   ||  |             CUC GACUCUGUUU UC UUGU   UGUC   CG  U                                                U ----------CU   U          C  C    UCC    ---  GU UCUCUAGUCGUGCCCUUAGACUGUCUUUCUCGUCACUCGUGCGUUCUC |
Stem-loop sequence | UUGUGAGUGAAUGAGCUGGGGCAAAAGAAACACACAGAAACUGACAGAAGAGAGUGAGCACACAAAAGUAAAUUGCAUAUGUUGCAUUUGCUUCUCUUGCGUGCUCACUGCUCUUUCUGUCAGAUUCCCGUGCUGAUCUCUUUGGCCUGUCCUUGUUCCUCUUUGUCUCAGUCUCUC |
1 | PMID:24559317
"Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis"; Jiang J, Lv M, Liang Y, Ma Z, Cao J; BMC Genomics. 15:146(2014). |