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BaseInfo

ncRNA ID novel_gma_miR1613
Species Glycine max
Class miRNA
Genome position Chr15:44954117-44954205 [+]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 24
Mature sequence(if miRNA) 1 - GAAAAUCCGUCGGAAAUAAUCCGU - 24
Stem-loop(if miRNA) --                UAA           AC         C
  GAAAAUCCGUCGGAAA   UCCGUGGGAAA  UCCGAUGGA A
  ||||||||||||||||   |||||||||||  ||||||||| U
  UUUUUAGGCAGCUUUU   AGGUACCUUUU  AGGUUGUCU U
GU                UUC           AA         U
Stem-loop sequence GAAAAUCCGUCGGAAAUAAUCCGUGGGAAAACUCCGAUGGACAUUUUCUGUUGGAAAUUUUCCAUGGACUUUUUUCGACGGAUUUUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773627.1
ncRNA:24   UGCCUAAUAAAGGCUGCCUAAAAG   1
  ***|*|||||||||||*||||||=
targets:181   UAUGUUUAUUUCCGACAGAUUUUU   204

2.5 PREDICTED: Glycine max uncharacterized LOC102659651 (LOC102659651), transcript variant X1, mRNA uncharacterized LOC102659651(LOC102659651) coding protein psRNATarget