ncRNA ID | novel_gma_miR1604 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:15782555-15782616 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294480 |
Length | 23 |
Mature sequence(if miRNA) | 1 - ACUCGGAGCAGACUCGGUGGACU - 23 |
Stem-loop(if miRNA) |
--     GA    A     --U         CA   ACUCG  GCAG CUCGG   GGACUCGUG  A   |||||  |||| |||||   |||||||||   UGAGC  CGUU GAGCC   UCUGAGCGC  A UU     -G    -     UGG         UC |
Stem-loop sequence | ACUCGGAGCAGACUCGGUGGACUCGUGCAAACUCGCGAGUCUGGUCCGAGUUGCGCGAGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014776497.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100782837 (LOC100782837), transcript variant X2, mRNA | uncharacterized LOC100782837(LOC100782837) | coding protein | psRNATarget | |||||||||
XM_006581755.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100782837 (LOC100782837), transcript variant X1, mRNA | uncharacterized LOC100782837(LOC100782837) | coding protein | psRNATarget |