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BaseInfo

ncRNA ID novel_gma_miR1604
Species Glycine max
Class miRNA
Genome position Chr7:15782555-15782616 [+]
Reference genome Glycine_max_v2.0
Source SRR1294480
Length 23
Mature sequence(if miRNA) 1 - ACUCGGAGCAGACUCGGUGGACU - 23
Stem-loop(if miRNA) --     GA    A     --U         CA
  ACUCG  GCAG CUCGG   GGACUCGUG  A
  |||||  |||| |||||   |||||||||
  UGAGC  CGUU GAGCC   UCUGAGCGC  A
UU     -G    -     UGG         UC
Stem-loop sequence ACUCGGAGCAGACUCGGUGGACUCGUGCAAACUCGCGAGUCUGGUCCGAGUUGCGCGAGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776497.1
ncRNA:23   UCAGGUGGCUCAGACGAGGCUCA   1
  *|***|||||||||*||||||||
targets:491   CGCGGACCGAGUCUACUCCGAGU   513

2.5 PREDICTED: Glycine max uncharacterized LOC100782837 (LOC100782837), transcript variant X2, mRNA uncharacterized LOC100782837(LOC100782837) coding protein psRNATarget
XM_006581755.2
ncRNA:23   UCAGGUGGCUCAGACGAGGCUCA   1
  *|***|||||||||*||||||||
targets:491   CGCGGACCGAGUCUACUCCGAGU   513

2.5 PREDICTED: Glycine max uncharacterized LOC100782837 (LOC100782837), transcript variant X1, mRNA uncharacterized LOC100782837(LOC100782837) coding protein psRNATarget