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BaseInfo

ncRNA ID novel_gma_miR1601
Species Glycine max
Class miRNA
Genome position Chr14:16627581-16627639 [+]
Reference genome Glycine_max_v2.0
Source SRR1451648
Length 24
Mature sequence(if miRNA) 1 - AAGGGCACCACUUCACCCGCGAUG - 24
Stem-loop(if miRNA) --AAG   -    - U  A       -U  U
     GGC ACCA C UC CCCGCGA  GU G
     ||| |||| | || |||||||  || U
     CCG UGGU G GG GGGUGCU  CG U
CCUUG   C    C U  -       UC  U
Stem-loop sequence AAGGGCACCACUUCACCCGCGAUGUUGUUUGCCUUCGUGGGGGUGCUGGUCGCCGUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573448.2
ncRNA:24   GUAGCGCCCACUUCACCACGGGAA   1
  |||||||||||||*||||||||||
targets:6364   CAUCGCGGGUGAAAUGGUGCCCUU   6387

1.5 PREDICTED: Glycine max MORC family CW-type zinc finger protein 3-like (LOC100782161), transcript variant X5, mRNA MORC family CW-type zinc finger protein 3-like(LOC100782161) coding protein psRNATarget
XM_006600869.2
ncRNA:24   GUAGCGCCCACUUCACCACGGGAA   1
  **|=|**||||||||||||||||*
targets:1153   GUUUGGUGGUGAAGUGGUGCCCUC   1176

3.0 PREDICTED: Glycine max UDP-glycosyltransferase 84B2-like (LOC102660440), mRNA UDP-glycosyltransferase 84B2-like(LOC102660440) coding protein psRNATarget