ncRNA ID | novel_gma_miR1601 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:16627581-16627639 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451648 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGGGCACCACUUCACCCGCGAUG - 24 |
Stem-loop(if miRNA) |
--AAG   -    - U  A       -U  U      GGC ACCA C UC CCCGCGA  GU G      ||| |||| | || |||||||  || U      CCG UGGU G GG GGGUGCU  CG U CCUUG   C    C U  -       UC  U |
Stem-loop sequence | AAGGGCACCACUUCACCCGCGAUGUUGUUUGCCUUCGUGGGGGUGCUGGUCGCCGUUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006573448.2 |
|
1.5 | PREDICTED: Glycine max MORC family CW-type zinc finger protein 3-like (LOC100782161), transcript variant X5, mRNA | MORC family CW-type zinc finger protein 3-like(LOC100782161) | coding protein | psRNATarget | |||||||||
XM_006600869.2 |
|
3.0 | PREDICTED: Glycine max UDP-glycosyltransferase 84B2-like (LOC102660440), mRNA | UDP-glycosyltransferase 84B2-like(LOC102660440) | coding protein | psRNATarget |