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BaseInfo

ncRNA ID	novel_gma_miR1598
Species	Glycine max
Class	miRNA
Genome position	Chr13:40083967-40084169 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451648
Length	21
Mature sequence(if miRNA)	1 - UCUUCCAGAAAAACCUUCUUC - 21
Stem-loop(if miRNA)	--   U  A   A                  C             -           A        A   U           -----------         G    A   UCU CC GAA AACCUUCUUCCAGAGAAG UUACUGGAAGAAG UUCUUCCAGAU AACAAUUU UUC UCCGGAAGAAC           AAAGUUACC GAAG A   ||| || ||| |||||||||||||||||| ||||||||||||| ||||||||||| |||||||| ||| |||||||||||           ||||||||| |||| G   AGA GG CUU UUGGAAGAAGGUUUCUUC AAUGACCUUCUUC AAGAAGGUCUA UUGUUAAA AAG AGGCUUUUUUG           UUUCAAUGG CUUC U CA   U  -   C                  -             C           C        C   U           AAACCACGUUU         A    U
Stem-loop sequence	UCUUCCAGAAAAACCUUCUUCCAGAGAAGCUUACUGGAAGAAGUUCUUCCAGAUAAACAAUUUAUUCUUCCGGAAGAACAAAGUUACCGGAAGAAGUUCUUCAGGUAACUUUUUUGCACCAAAGUUUUUUCGGAUGAACAAAUUGUUCAUCUGGAAGAACCUUCUUCCAGUAACUUCUUUGGAAGAAGGUUCUUCGGUAGAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006602627.2	ncRNA:21   CUUCUUCCAAAAAGACCUUCU   1   |||*||||||*|||||||||| targets:2128   GAAAAAGGUUCUUCUGGAAGA   2148 Target Full Sequence	2.5	PREDICTED: Glycine max probable WRKY transcription factor 33 (LOC100792833), transcript variant X2, mRNA	probable WRKY transcription factor 33(LOC100792833)	coding protein	psRNATarget
XM_014771244.1	ncRNA:21   CUUCUUCCAAAAAGACCUUCU   1   |||*||||||*|||||||||| targets:2130   GAAAAAGGUUCUUCUGGAAGA   2150 Target Full Sequence	2.5	PREDICTED: Glycine max probable WRKY transcription factor 33 (LOC100792833), transcript variant X1, mRNA	probable WRKY transcription factor 33(LOC100792833)	coding protein	psRNATarget
XM_003534620.3	ncRNA:21   CUUCUUCCAAAAAGACCUUCU   1   *||*||||||*|||||||||| targets:2107   AAAAAAGGUUCUUCUGGAAGA   2127 Target Full Sequence	2.5	PREDICTED: Glycine max probable WRKY transcription factor 33 (LOC100776837), mRNA	probable WRKY transcription factor 33(LOC100776837)	coding protein	psRNATarget
XM_006577803.2	ncRNA:21   CUUC-UUCCAAAAAGACCUUCU   1   ||||-||*|||||||||||||| targets:599   GAAGUAAAGUUUUUCUGGAAGA   620 Target Full Sequence	3.0	PREDICTED: Glycine max homeobox protein ATH1-like (LOC100820354), transcript variant X2, mRNA	homeobox protein ATH1-like(LOC100820354)	coding protein	psRNATarget
XM_006577804.2	ncRNA:21   CUUC-UUCCAAAAAGACCUUCU   1   ||||-||*|||||||||||||| targets:941   GAAGUAAAGUUUUUCUGGAAGA   962 Target Full Sequence	3.0	PREDICTED: Glycine max homeobox protein ATH1-like (LOC100820354), transcript variant X3, mRNA	homeobox protein ATH1-like(LOC100820354)	coding protein	psRNATarget
XM_006577805.2	ncRNA:21   CUUC-UUCCAAAAAGACCUUCU   1   ||||-||*|||||||||||||| targets:1050   GAAGUAAAGUUUUUCUGGAAGA   1071 Target Full Sequence	3.0	PREDICTED: Glycine max homeobox protein ATH1-like (LOC100820354), transcript variant X1, mRNA	homeobox protein ATH1-like(LOC100820354)	coding protein	psRNATarget