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BaseInfo

ncRNA ID novel_gma_miR1596
Species Glycine max
Class miRNA
Genome position Chr13:23382308-23382424 [+]
Reference genome Glycine_max_v2.0
Source SRR1451648;SRR1451610
Length 24
Mature sequence(if miRNA) 1 - UAUGACCCAUACGAAUUACUGAUC - 24
Stem-loop(if miRNA) --     C     C A                                          
  UAUGA CCAUA G AUUACUGAUCCGUAUGGUUUAUACGGAUUAUCAAUCCGUAUGG
  ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||U
  AUACU GGUAU C UAGUGGCUAGGCAUACUAAGUAUGCCUAAUAGUUAGGCAUACU
GC     A     A C                                          
Stem-loop sequence UAUGACCCAUACGAAUUACUGAUCCGUAUGGUUUAUACGGAUUAUCAAUCCGUAUGGUUCAUACGGAUUGAUAAUCCGUAUGAAUCAUACGGAUCGGUGAUCCAUAUGGAUCAUACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532177.3
ncRNA:24   CUAGUCAUUAAGCAUACCCAGUAU   1
  *|**||*|||||*|||||||||||
targets:907   CAAGAGGAAUUCUUAUGGGUCAUA   930

2.5 PREDICTED: Glycine max nucleolar GTP-binding protein 1 (LOC100794359), transcript variant X2, mRNA nucleolar GTP-binding protein 1(LOC100794359) coding protein psRNATarget
XM_014779471.1
ncRNA:24   CUAGUCAUUAAGCAUACCCAGUAU   1
  *|**||*|||||*|||||||||||
targets:931   CAAGAGGAAUUCUUAUGGGUCAUA   954

2.5 PREDICTED: Glycine max nucleolar GTP-binding protein 1 (LOC100794359), transcript variant X1, mRNA nucleolar GTP-binding protein 1(LOC100794359) coding protein psRNATarget