ncRNA ID | novel_gma_miR1596 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:23382308-23382424 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451648;SRR1451610 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUGACCCAUACGAAUUACUGAUC - 24 |
Stem-loop(if miRNA) |
--     C     C A                                             UAUGA CCAUA G AUUACUGAUCCGUAUGGUUUAUACGGAUUAUCAAUCCGUAUGG   ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||U   AUACU GGUAU C UAGUGGCUAGGCAUACUAAGUAUGCCUAAUAGUUAGGCAUACU GC     A     A C                                           |
Stem-loop sequence | UAUGACCCAUACGAAUUACUGAUCCGUAUGGUUUAUACGGAUUAUCAAUCCGUAUGGUUCAUACGGAUUGAUAAUCCGUAUGAAUCAUACGGAUCGGUGAUCCAUAUGGAUCAUACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003532177.3 |
|
2.5 | PREDICTED: Glycine max nucleolar GTP-binding protein 1 (LOC100794359), transcript variant X2, mRNA | nucleolar GTP-binding protein 1(LOC100794359) | coding protein | psRNATarget | |||||||||
XM_014779471.1 |
|
2.5 | PREDICTED: Glycine max nucleolar GTP-binding protein 1 (LOC100794359), transcript variant X1, mRNA | nucleolar GTP-binding protein 1(LOC100794359) | coding protein | psRNATarget |