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BaseInfo

ncRNA ID	novel_gma_miR1593
Species	Glycine max
Class	miRNA
Genome position	Chr12:18032027-18032188 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451648;SRR1451615
Length	22
Mature sequence(if miRNA)	141 - CAAAAUCGACUUGUAAGGUGAG - 162
Stem-loop(if miRNA)	--                      A                                            --G       AUG   CAAAAUCGACUUGUAAGGUGAG AUUACUCUCCACUUAUAUAGUUUAUCUCGACACUAUUUUUAUUU   AUGGGGC   U   |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||   GUUUUGGCUGAACAUUCCACUC UAAUGAGGGGUGAAUAUAUCAAAUAGAGCUGUGAUAGAAAUAAG   UACCCUG   U AU                      C                                            UUA       AAG
Stem-loop sequence	CAAAAUCGACUUGUAAGGUGAGAAUUACUCUCCACUUAUAUAGUUUAUCUCGACACUAUUUUUAUUUGAUGGGGCAUGUUGAAGUCCCAUAUUGAAUAAAGAUAGUGUCGAGAUAAACUAUAUAAGUGGGGAGUAAUCCUCACCUUACAAGUCGGUUUUGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014775065.1	ncRNA:22   GAGUGGAAUGUUCAGCUAAAAC   1   ||||=||||||||*|||||||| targets:2827   CUCAUCUUACAAGCCGAUUUUG   2848 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X4, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775059.1	ncRNA:22   GAGUGGAAUGUUCAGCUAAAAC   1   ||||=||||||||*|||||||| targets:2680   CUCAUCUUACAAGCCGAUUUUG   2701 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X1, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775066.1	ncRNA:22   GAGUGGAAUGUUCAGCUAAAAC   1   ||||=||||||||*|||||||| targets:2824   CUCAUCUUACAAGCCGAUUUUG   2845 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X5, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775062.1	ncRNA:22   GAGUGGAAUGUUCAGCUAAAAC   1   ||||=||||||||*|||||||| targets:2825   CUCAUCUUACAAGCCGAUUUUG   2846 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X3, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014775060.1	ncRNA:22   GAGUGGAAUGUUCAGCUAAAAC   1   ||||=||||||||*|||||||| targets:2825   CUCAUCUUACAAGCCGAUUUUG   2846 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102659952 (LOC102659952), transcript variant X2, mRNA	uncharacterized LOC102659952(LOC102659952)	coding protein	psRNATarget
XM_014772037.1	ncRNA:22   GAGUGGAAUGUUCAGCUAAAAC   1   ||||||||*||||*|||||||| targets:149   CUCACCUUUCAAGCCGAUUUUG   170 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106797507 (LOC106797507), mRNA	uncharacterized LOC106797507(LOC106797507)	coding protein	psRNATarget