ncRNA ID | novel_gma_miR1592 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:39891806-39891922 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451648;SRR1451649;SRR1451620 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUUAAUUCCUGUAAUCUUCCUC - 22 |
Stem-loop(if miRNA) |
--          G                  AUUUU  UUUCUCUC       U    -   UA   UUUAAUUCCU UAAUCUUCCUCGUUACUU     GG        GUGUGAA AUAU CAU  A   |||||||||| ||||||||||||||||||     ||        ||||||| |||| |||  U   AAAUUAAGGA AUUAGAAGGAGUAAUGAA     CC        UACAUUU UGUA GUA  A AA          -                  -CGUC  --------       -    C   CG |
Stem-loop sequence | UUUAAUUCCUGUAAUCUUCCUCGUUACUUAUUUUGGUUUCUCUCGUGUGAAUAUAUCAUUAAUAGCAUGCAUGUUUUACAUCCCUGCAAGUAAUGAGGAAGAUUAAGGAAUUAAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006573834.2 |
|
2.5 | PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 10 (LOC102669364), mRNA | cysteine-rich receptor-like protein kinase 10(LOC102669364) | coding protein | psRNATarget |