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BaseInfo

ncRNA ID novel_gma_miR1592
Species Glycine max
Class miRNA
Genome position Chr12:39891806-39891922 [+]
Reference genome Glycine_max_v2.0
Source SRR1451648;SRR1451649;SRR1451620
Length 22
Mature sequence(if miRNA) 1 - UUUAAUUCCUGUAAUCUUCCUC - 22
Stem-loop(if miRNA) --          G                  AUUUU  UUUCUCUC       U    -   UA
  UUUAAUUCCU UAAUCUUCCUCGUUACUU     GG        GUGUGAA AUAU CAU  A
  |||||||||| ||||||||||||||||||     ||        ||||||| |||| |||  U
  AAAUUAAGGA AUUAGAAGGAGUAAUGAA     CC        UACAUUU UGUA GUA  A
AA          -                  -CGUC  --------       -    C   CG
Stem-loop sequence UUUAAUUCCUGUAAUCUUCCUCGUUACUUAUUUUGGUUUCUCUCGUGUGAAUAUAUCAUUAAUAGCAUGCAUGUUUUACAUCCCUGCAAGUAAUGAGGAAGAUUAAGGAAUUAAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573834.2
ncRNA:22   CUCCUUCUAAUGUCCUUAAUUU   1
  **|||*||||||||||||||*|
targets:1020   AUGGAUGAUUACAGGAAUUAUA   1041

2.5 PREDICTED: Glycine max cysteine-rich receptor-like protein kinase 10 (LOC102669364), mRNA cysteine-rich receptor-like protein kinase 10(LOC102669364) coding protein psRNATarget