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BaseInfo

ncRNA ID	novel_gma_miR1588
Species	Glycine max
Class	miRNA
Genome position	Chr6:47117310-47117403 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294480
Length	24
Mature sequence(if miRNA)	1 - AAUCAAAACAUGACACGUGACAGU - 24
Stem-loop(if miRNA)	--      A         C       UCA   AAAACAACAAUACAU   UGUCAC UGUCAUGUU UGAUUGG   AUG               U   |||||| ||||||||| |||||||   |||   ACAGUG ACAGUACAA ACUAACC   AGU               U UG      C         A       UAU   UAAGAUACUUUCUAC
Stem-loop sequence	UGUCACAUGUCAUGUUCUGAUUGGUCAAUGAAAACAACAAUACAUUUCAUCUUUCAUAGAAUUGAUAUCCAAUCAAAACAUGACACGUGACAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170936.1	ncRNA:24   UGACAGUGCACAGUACAAAACUAA   1   |||*|||||||||||||||||||* targets:106   ACUUUCACGUGUCAUGUUUUGAUG   129 Target Full Sequence	1.0	Sequence 8600 from Patent EP2559767	NA	coding protein	psRNATarget
HI410475.1	ncRNA:24   UGACAGUGCACAGUACAAAACUAA   1   |||*|||||||||||||||||||* targets:106   ACUUUCACGUGUCAUGUUUUGAUG   129 Target Full Sequence	1.0	Sequence 8600 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242605.1	ncRNA:24   UGACAGUGCACAGUACAAAACUAA   1   |||*|||||||||||||||||||* targets:106   ACUUUCACGUGUCAUGUUUUGAUG   129 Target Full Sequence	1.0	Sequence 8600 from Patent EP2985353	NA	coding protein	psRNATarget
XM_006573624.2	ncRNA:24   UGACAGUGCACAGUACAAAACUAA   1   |||*|||||||||||||||||||* targets:1515   ACUUUCACGUGUCAUGUUUUGAUG   1538 Target Full Sequence	1.0	PREDICTED: Glycine max transcription factor bHLH18-like (LOC100816551), transcript variant X2, mRNA	transcription factor bHLH18-like(LOC100816551)	coding protein	psRNATarget
XM_006573623.2	ncRNA:24   UGACAGUGCACAGUACAAAACUAA   1   |||*|||||||||||||||||||* targets:1527   ACUUUCACGUGUCAUGUUUUGAUG   1550 Target Full Sequence	1.0	PREDICTED: Glycine max transcription factor bHLH18-like (LOC100816551), transcript variant X1, mRNA	transcription factor bHLH18-like(LOC100816551)	coding protein	psRNATarget
XM_014762964.1	ncRNA:24   UGACAGUGCACAGUACAAAACUAA   1   |=||||||||||||*||||||||| targets:169   AUUGUCACGUGUCACGUUUUGAUU   192 Target Full Sequence	1.5	PREDICTED: Glycine max fasciclin-like arabinogalactan protein 1 (LOC106794953), mRNA	fasciclin-like arabinogalactan protein 1(LOC106794953)	coding protein	psRNATarget