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BaseInfo

ncRNA ID novel_gma_miR1579
Species Glycine max
Class miRNA
Genome position Chr4:31867782-31867990 [+]
Reference genome Glycine_max_v2.0
Source SRR1294480
Length 23
Mature sequence(if miRNA) 1 - AAAGGAGAAAAGGAUUUUAAACU - 23
Stem-loop(if miRNA) --                                     -------        -  -CG  ----UAUCAU     --UUG     UUA       AUAAAUACAU   CAA
  AAAGGAGAAAAGGAUUUUAAACUUUUCGUAGAGUUAU       UCUAAUUU UG   GU          UCCCA     GCAAU   GGGCAGU          ACU   A
  |||||||||||||||||||||||||||||||||||||       |||||||| ||   ||          |||||     |||||   |||||||          |||
  UUUCCUCUUUUCCUAAAAUUUGAAAAGCAUCUCAAUA       AGAUUAAA AC   CA          AGGGU     UGUUA   UUUGUCG          UGA   U
AC                                     AAAUUUG        U  AUA  UAAAUUUUUU     UUUUA     -CC       -CACUCCUUU   CUA
Stem-loop sequence AAAGGAGAAAAGGAUUUUAAACUUUUCGUAGAGUUAUUCUAAUUUUGCGGUUAUCAUUCCCAUUGGCAAUUUAGGGCAGUAUAAAUACAUACUCAAAUAUCAGUUUUCCUCACGCUGUUUCCAUUGUAUUUUUGGGAUUUUUUAAAUACAUACAUAAAUUAGAGUUUAAAAUAACUCUACGAAAAGUUUAAAAUCCUUUUCUCCUUUCA