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BaseInfo

ncRNA ID	novel_gma_miR1578
Species	Glycine max
Class	miRNA
Genome position	Chr2:40579919-40579980 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451647
Length	21
Mature sequence(if miRNA)	42 - UCAUCCGGAAGAACCUUCUUC - 62
Stem-loop(if miRNA)	--      A         AAGUGC     GA   AGAAGG UCUUCCGGA      UUCCG  A   |||||| |||||||||      |||||   UCUUCC AGAAGGCCU      AAGGC  C CU      A         ACUGGA     AC
Stem-loop sequence	AGAAGGAUCUUCCGGAAAGUGCUUCCGGAACCACGGAAAGGUCAUCCGGAAGAACCUUCUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003521199.3	ncRNA:21   CUUCUUCCAAGAAGGCCUACU   1   ||||||||||||||||||||| targets:989   GAAGAAGGUUCUUCCGGAUGA   1009 Target Full Sequence	0.0	PREDICTED: Glycine max pre-mRNA-splicing factor 18-like (LOC100798833), mRNA	pre-mRNA-splicing factor 18-like(LOC100798833)	coding protein	psRNATarget
XM_003554207.3	ncRNA:21   CUUCUUCCAAGAAGGCCUACU   1   ||||||||||||||||||||| targets:1403   GAAGAAGGUUCUUCCGGAUGA   1423 Target Full Sequence	0.0	PREDICTED: Glycine max pre-mRNA-splicing factor 18-like (LOC100785799), mRNA	pre-mRNA-splicing factor 18-like(LOC100785799)	coding protein	psRNATarget
XM_006573284.2	ncRNA:21   CUUCUUCCAAGAAGGCCUACU   1   ||||||||||||||||||*|* targets:1822   GAAGAAGGUUCUUCCGGAAGU   1842 Target Full Sequence	2.5	PREDICTED: Glycine max aquaporin PIP1-2-like (LOC100781984), mRNA	aquaporin PIP1-2-like(LOC100781984)	coding protein	psRNATarget
XM_006583167.2	ncRNA:21   CUUCUUCCAAGAAGGCCUACU   1   *=|||||||||||||||*||* targets:400   AGAGAAGGUUCUUCCGGUUGU   420 Target Full Sequence	2.5	PREDICTED: Glycine max protein TSS-like (LOC100808136), transcript variant X5, mRNA	protein TSS-like(LOC100808136)	coding protein	psRNATarget
XM_014777743.1	ncRNA:21   CUUCUUCCAAGAAGGCCUACU   1   *=|||||||||||||||*||* targets:401   AGAGAAGGUUCUUCCGGUUGU   421 Target Full Sequence	2.5	PREDICTED: Glycine max protein TSS-like (LOC100808136), transcript variant X3, mRNA	protein TSS-like(LOC100808136)	coding protein	psRNATarget
XM_014777741.1	ncRNA:21   CUUCUUCCAAGAAGGCCUACU   1   *=|||||||||||||||*||* targets:401   AGAGAAGGUUCUUCCGGUUGU   421 Target Full Sequence	2.5	PREDICTED: Glycine max protein TSS-like (LOC100808136), transcript variant X1, mRNA	protein TSS-like(LOC100808136)	coding protein	psRNATarget
XM_014777744.1	ncRNA:21   CUUCUUCCAAGAAGGCCUACU   1   *=|||||||||||||||*||* targets:401   AGAGAAGGUUCUUCCGGUUGU   421 Target Full Sequence	2.5	PREDICTED: Glycine max protein TSS-like (LOC100808136), transcript variant X4, mRNA	protein TSS-like(LOC100808136)	coding protein	psRNATarget
XM_014777742.1	ncRNA:21   CUUCUUCCAAGAAGGCCUACU   1   *=|||||||||||||||*||* targets:401   AGAGAAGGUUCUUCCGGUUGU   421 Target Full Sequence	2.5	PREDICTED: Glycine max protein TSS-like (LOC100808136), transcript variant X2, mRNA	protein TSS-like(LOC100808136)	coding protein	psRNATarget
XM_003540639.3	ncRNA:21   CUUCUUCCAAGAAGGCCUACU   1   *|*||||||||||||*||||| targets:1648   CAUGAAGGUUCUUCCUGAUGA   1668 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At2g15630, mitochondrial (LOC100791654), mRNA	pentatricopeptide repeat-containing protein At2g15630, mitochondrial(LOC100791654)	coding protein	psRNATarget
XM_014772428.1	ncRNA:21   CUUCUUCC-AAGAAGGCCUACU   1   ||||||||-||||||||||||| targets:202   GAAGAAGGGUUCUUCCGGAUGA   223 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC102661169 (LOC102661169), mRNA	uncharacterized LOC102661169(LOC102661169)	coding protein	psRNATarget