ncRNA ID | novel_gma_miR1576 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:29977629-29977757 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294480 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACUUUCUACAUCGGUUUUUAAGAC - 24 |
Stem-loop(if miRNA) |
--  U             U   A                     G -   C           UGA   AC UUCUACAUCGGUU UUA GACAGCCGAUGUAGAAAUCUG C AUU UAAGACGGGUU   A   || ||||||||||||| ||| ||||||||||||||||||||| | ||| |||||||||||   UG AAGAUGUAGCCAA AAU CUGUUGGCUACAUCUUUAGAC G UAA AUUCUGCCCGA   G AC  U             U   C                     G G   A           CCA |
Stem-loop sequence | ACUUUCUACAUCGGUUUUUAAGACAGCCGAUGUAGAAAUCUGGCAUUCUAAGACGGGUUUGAAGACCAGCCCGUCUUAAAAUGGGCAGAUUUCUACAUCGGUUGUCCUAAUAACCGAUGUAGAAUGUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767461.1 |
|
1.0 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget | |||||||||
XM_014767461.1 |
|
3.0 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget |