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BaseInfo

ncRNA ID novel_gma_miR1576
Species Glycine max
Class miRNA
Genome position Chr3:29977629-29977757 [+]
Reference genome Glycine_max_v2.0
Source SRR1294480
Length 24
Mature sequence(if miRNA) 1 - ACUUUCUACAUCGGUUUUUAAGAC - 24
Stem-loop(if miRNA) --  U             U   A                     G -   C           UGA
  AC UUCUACAUCGGUU UUA GACAGCCGAUGUAGAAAUCUG C AUU UAAGACGGGUU   A
  || ||||||||||||| ||| ||||||||||||||||||||| | ||| |||||||||||
  UG AAGAUGUAGCCAA AAU CUGUUGGCUACAUCUUUAGAC G UAA AUUCUGCCCGA   G
AC  U             U   C                     G G   A           CCA
Stem-loop sequence ACUUUCUACAUCGGUUUUUAAGACAGCCGAUGUAGAAAUCUGGCAUUCUAAGACGGGUUUGAAGACCAGCCCGUCUUAAAAUGGGCAGAUUUCUACAUCGGUUGUCCUAAUAACCGAUGUAGAAUGUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:24   CAGAAUUUUUGGCUACAUCUUUCA   1
  |||--||*||||||||||||||||
targets:676   GUC--AAUAACCGAUGUAGAAAGU   697

1.0 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_014767461.1
ncRNA:24   CAGAAUUUUUGGCUACAUCUUUCA   1
  **|*|=|*|||||||||||||||*
targets:651   CGCGUGAUAACCGAUGUAGAAAGG   674

3.0 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget