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BaseInfo

ncRNA ID novel_gma_miR1572
Species Glycine max
Class miRNA
Genome position Chr1:41441880-41441978 [-]
Reference genome Glycine_max_v2.0
Source SRR1451647
Length 24
Mature sequence(if miRNA) 1 - GCUAAUAACCGUCUUUGAAUGCCU - 24
Stem-loop(if miRNA) --CA                    A              A    AAACU
    GUUCAAAGACGGUUAUUAGC AAUAACCGUCUUUG AUGU     C
    |||||||||||||||||||| |||||||||||||| ||||     U
    UAAGUUUCUGCCAAUAAUCG UUAUUGGCAGAAAC UACA     G
UCCG                    A              A    ACACA
Stem-loop sequence CAGUUCAAAGACGGUUAUUAGCAAAUAACCGUCUUUGAAUGUAAACUCUGACACAACAUACAAAGACGGUUAUUAGCUAAUAACCGUCUUUGAAUGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   UCCGUAAGUUUCUGCCAAUAAUCG   1
  **||||||||||=|||||||||||
targets:1651   UAGCAUUCAAAGGCGGUUAUUAGC   1674

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UCCGUAAGUUUCUGCCAAUAAUCG   1
  ***|||||||||||||||||||*|
targets:1486   UAACAUUCAAAGACGGUUAUUAAC   1509

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UCCGUAAGUUUCUGCCAAUAAUCG   1
  ***|||||||||||||||||||*|
targets:1541   CAACAUUCAAAGACGGUUAUUAAC   1564

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget