Search result

BaseInfo

ncRNA ID	novel_gma_miR1560
Species	Glycine max
Class	miRNA
Genome position	Chr2:13826013-13826162 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1294480;SRR1294481;SRR2045374;SRR1295524;SRR1295525;SRR1295527
Length	21
Mature sequence(if miRNA)	130 - AGAAGGUAAAAGGAUUGAGCU - 150
Stem-loop(if miRNA)	--     G     -           C    -                            CUUCUAUA      CUC   AGAAG UAAAA GGAUUGAGCUU UUCC AUAAGCUAAAAUCAGCUUAUGCACUUAA        GAAGUU   U   ||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||        ||||||   C   UUUUC AUUUU CUUAACUUGAA AAGG UAUUCGAUUUUAGUUGAAUACGUGAAUU        UUUCAA   A AU     G     A           -    C                            CAAAAACC      UUU
Stem-loop sequence	AGAAGGUAAAAGGAUUGAGCUUCUUCCAUAAGCUAAAAUCAGCUUAUGCACUUAACUUCUAUAGAAGUUCUCUCAUUUAACUUUCCAAAAACUUAAGUGCAUAAGUUGAUUUUAGCUUAUCGGAAAAGUUCAAUUCAUUUUAGCUUUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006588465.2	ncRNA:21   UCGAGUUAGGAAAAUGGAAGA   1   **||||*|||||||=|||||| targets:1842   UCCUCACUCCUUUUGCCUUCU   1862 Target Full Sequence	2.5	PREDICTED: Glycine max protein FAR1-RELATED SEQUENCE 11 (LOC100810717), mRNA	protein FAR1-RELATED SEQUENCE 11(LOC100810717)	coding protein	psRNATarget