ncRNA ID | novel_gma_miR1555 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:21067396-21067509 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451646 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGGUGAGAAUAAAGAAUAACUCU - 24 |
Stem-loop(if miRNA) |
--AA    -A   C   G                 U           AUUGUA     UCA     UUAU  UUU UUC UCACCAUUCAUUUUUUU GAAAUUUAAUG      AUAAG   U     ||||  ||| ||| ||||||||||||||||| |||||||||||      |||||     AAUA  AAA AAG AGUGGUAAGUAAAAAAA CUUUAAAUUAC      UAUUC   U UCUC    AG   U   -                 -           -----C     UAA |
Stem-loop sequence | AAUUAUAUUUCUUCGUCACCAUUCAUUUUUUUUGAAAUUUAAUGAUUGUAAUAAGUCAUUAAUCUUAUCCAUUAAAUUUCAAAAAAAUGAAUGGUGAGAAUAAAGAAUAACUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014779347.1 |
|
2.5 | PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At1g14390 (LOC100789785), mRNA | probable LRR receptor-like serine/threonine-protein kinase At1g14390(LOC100789785) | coding protein | psRNATarget |