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BaseInfo

ncRNA ID novel_gma_miR1555
Species Glycine max
Class miRNA
Genome position Chr6:21067396-21067509 [-]
Reference genome Glycine_max_v2.0
Source SRR1451646
Length 24
Mature sequence(if miRNA) 1 - AUGGUGAGAAUAAAGAAUAACUCU - 24
Stem-loop(if miRNA) --AA    -A   C   G                 U           AUUGUA     UCA
    UUAU  UUU UUC UCACCAUUCAUUUUUUU GAAAUUUAAUG      AUAAG   U
    ||||  ||| ||| ||||||||||||||||| |||||||||||      |||||
    AAUA  AAA AAG AGUGGUAAGUAAAAAAA CUUUAAAUUAC      UAUUC   U
UCUC    AG   U   -                 -           -----C     UAA
Stem-loop sequence AAUUAUAUUUCUUCGUCACCAUUCAUUUUUUUUGAAAUUUAAUGAUUGUAAUAAGUCAUUAAUCUUAUCCAUUAAAUUUCAAAAAAAUGAAUGGUGAGAAUAAAGAAUAACUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014779347.1
ncRNA:24   UCUCAAUAAGAAAUAAGAGUGGUA   1
  |**|**||||||||||||||=|||
targets:376   ACUGAAAUUCUUUAUUCUCAUCAU   399

2.5 PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At1g14390 (LOC100789785), mRNA probable LRR receptor-like serine/threonine-protein kinase At1g14390(LOC100789785) coding protein psRNATarget