ncRNA ID | novel_gma_miR1553 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:11172494-11172712 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451646;SRR1451655 |
Length | 24 |
Mature sequence(if miRNA) | 196 - AUUAACAUCGGUUUUGUACAAAAC - 219 |
Stem-loop(if miRNA) |
--                                                                                                         AU   AUUAACAUCGGUUUUGUACAAAACCGAUGUUAAGUUAAACGCGGUGGCAUAUUUGUAAAUAAAGUAUCAUUCUUAACAUCGGUUUUCCAAAAAACCGAUGUUAAC  C   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  A   UAAUUGUAGCCAAAACAUGUUUUGGCUACAAUUCAAUUUGCGCCACCGUAUAAACAUUUAUUUCAUAGUAAGAAUUGUAGCCAAAAGGUUUUUUGGCUACAAUUG  U AA                                                                                                         AU |
Stem-loop sequence | AUUAACAUCGGUUUUGUACAAAACCGAUGUUAAGUUAAACGCGGUGGCAUAUUUGUAAAUAAAGUAUCAUUCUUAACAUCGGUUUUCCAAAAAACCGAUGUUAACAUCAUUAGUUAACAUCGGUUUUUUGGAAAACCGAUGUUAAGAAUGAUACUUUAUUUACAAAUAUGCCACCGCGUUUAACUUAACAUCGGUUUUGUACAAAACCGAUGUUAAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014762963.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100794765 (LOC100794765), mRNA | uncharacterized LOC100794765(LOC100794765) | coding protein | psRNATarget |