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BaseInfo

ncRNA ID novel_gma_miR1553
Species Glycine max
Class miRNA
Genome position Chr1:11172494-11172712 [-]
Reference genome Glycine_max_v2.0
Source SRR1451646;SRR1451655
Length 24
Mature sequence(if miRNA) 196 - AUUAACAUCGGUUUUGUACAAAAC - 219
Stem-loop(if miRNA) --                                                                                                         AU
  AUUAACAUCGGUUUUGUACAAAACCGAUGUUAAGUUAAACGCGGUGGCAUAUUUGUAAAUAAAGUAUCAUUCUUAACAUCGGUUUUCCAAAAAACCGAUGUUAAC  C
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  A
  UAAUUGUAGCCAAAACAUGUUUUGGCUACAAUUCAAUUUGCGCCACCGUAUAAACAUUUAUUUCAUAGUAAGAAUUGUAGCCAAAAGGUUUUUUGGCUACAAUUG  U
AA                                                                                                         AU
Stem-loop sequence AUUAACAUCGGUUUUGUACAAAACCGAUGUUAAGUUAAACGCGGUGGCAUAUUUGUAAAUAAAGUAUCAUUCUUAACAUCGGUUUUCCAAAAAACCGAUGUUAACAUCAUUAGUUAACAUCGGUUUUUUGGAAAACCGAUGUUAAGAAUGAUACUUUAUUUACAAAUAUGCCACCGCGUUUAACUUAACAUCGGUUUUGUACAAAACCGAUGUUAAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762963.1
ncRNA:24   CAAAACAU-GUUUUGGCUACAAUUA   1
  |||**|*|-||||||||||||||||
targets:278   GUUACGAAUCAAAACCGAUGUUAAU   302

3.0 PREDICTED: Glycine max uncharacterized LOC100794765 (LOC100794765), mRNA uncharacterized LOC100794765(LOC100794765) coding protein psRNATarget