ncRNA ID | novel_gma_miR1552 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:18005540-18005695 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451646 |
Length | 24 |
Mature sequence(if miRNA) | 133 - UGUUAAGUGAUGACGUGGUAGACA - 156 |
Stem-loop(if miRNA) |
--U        A       GU         A           CA   U     AU    C   U  A  C     CAC    GUUAAGUG UGACGUG  AGACAUAGU UUACGUUAUCA  UCU GUCAC  AUAC UCA UG CA AUCAU   U    |||||||| |||||||  ||||||||| |||||||||||  ||| |||||  |||| ||| || || |||||    CAAUUCAC ACUGUAC  UUUGUGUCA AGUGCGGUAGU  AGG UAGUG  UGUG AGU AU GU UAGUA   U AGG        A       UG         C           AC   U     GC    C   C  G  A     ACU |
Stem-loop sequence | UGUUAAGUGAUGACGUGGUAGACAUAGUAUUACGUUAUCACAUCUUGUCACAUAUACCUCAUUGACACAUCAUCACUUUCAAUGAUAUGGUACUGACGUGUCGGUGAUUGGACAUGAUGGCGUGACACUGUGUUUGUCAUGUCAACACUUAACGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766262.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA | uncharacterized LOC100804377(LOC100804377) | coding protein | psRNATarget |