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BaseInfo

ncRNA ID novel_gma_miR1549
Species Glycine max
Class miRNA
Genome position Chr20:8160034-8160090 [+]
Reference genome Glycine_max_v2.0
Source SRR1294480;SRR1294481;SRR1294485;SRR2045228;SRR1295516;SRR1295518;SRR1292925;SRR1295520;SRR1295526
Length 24
Mature sequence(if miRNA) 34 - CGUGGCACUAAAGAAUGACGUGGC - 57
Stem-loop(if miRNA) --GAG    -A              -  A
     GUCA  UUUUAGUGCCACGU GG C
     ||||  |||||||||||||| || U
     CAGU  GAAAUCACGGUGCA CC A
CGGUG    AA              A  U
Stem-loop sequence GAGGUCAAUUUUAGUGCCACGUGGACUAUCCAACGUGGCACUAAAGAAUGACGUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538749.3
ncRNA:24   CGGUGCAGUAAGAAAUCACGGUGC   1
  *=||||*|||*||||||||||||*
targets:1444   UUCACGCCAUACUUUAGUGCCACU   1467

3.0 PREDICTED: Glycine max subtilisin-like protease SBT1.7 (LOC100801866), mRNA subtilisin-like protease SBT1.7(LOC100801866) coding protein psRNATarget