ncRNA ID | novel_gma_miR1545 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:10566212-10566295 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294480 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CAAUUGGGCUUGGAUCUGGAAU - 22 |
Stem-loop(if miRNA) |
-   AUC   UG      C   --AC       G GUUUUAA  UUU   AUU  GGCCUA UUG    UAAUUCU U       U  |||   |||  |||||| |||    ||||||| |       U  AAG   UAG  UCGGGU AAC    AUUAAGA G       U U   GUC   GU      U   GAAU       G ACUUUAA |
Stem-loop sequence | UUUAUCAUUUGGGCCUACUUGACUAAUUCUGUGUUUUAAUUUAAUUUCAGGAGAAUUAUAAGCAAUUGGGCUUGGAUCUGGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003520580.3 |
|
3.0 | PREDICTED: Glycine max cation/H(+) antiporter 20 (LOC100798644), mRNA | cation/H(+) antiporter 20(LOC100798644) | coding protein | psRNATarget |