ncRNA ID | novel_gma_miR1543 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:13802987-13803132 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451646;SRR1451617;SRR1451622 |
Length | 24 |
Mature sequence(if miRNA) | 123 - UUUUUAAGACGGUUUUUAUGGAAC - 146 |
Stem-loop(if miRNA) |
--   UUG                  UU   C         AA      ---A   U    C          AAG   UCU   AAAAAUCGUCUUAGAAAG  UAC CUUCUAAGA  GUUUUU    GUU AAAA CAUCUUAGAA   U   |||   ||||||||||||||||||  ||| |||||||||  ||||||    ||| |||| ||||||||||   AGG   UUUUUGGCAGAAUUUUUU  AUG GAAGAUUUU  UAAAAA    UAA UUUU GUAGAAUCUU   A CA   -UA                  CU   A         AC      AAAG   U    A          ACU |
Stem-loop sequence | UCUUUGAAAAAUCGUCUUAGAAAGUUUACCCUUCUAAGAAAGUUUUUAGUUUAAAACCAUCUUAGAAAAGUAUCAUUCUAAGAUGAUUUUUAAUGAAAAAAAAUCAUUUUAGAAGAGUAUCUUUUUUAAGACGGUUUUUAUGGAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773077.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized protein C26H5.07c-like (LOC102666872), mRNA | uncharacterized protein C26H5.07c-like(LOC102666872) | coding protein | psRNATarget |