Search result

BaseInfo

ncRNA ID	novel_gma_miR1534
Species	Glycine max
Class	miRNA
Genome position	Chr19:4766774-4766989 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451646;SRR1451610
Length	24
Mature sequence(if miRNA)	1 - UGAAAACUGAUGUCGUUAAGCACU - 24
Stem-loop(if miRNA)	--                      C                                  -------AUAAUUCA       C                          AAG   UGAAAACUGAUGUCGUUAAGCA UUACAACAUCGGUUUUCAAGUAACCGAUGUUAAA               GUUUUAA AUCGAUUAUUUGAAAACCGAUGUUGU   U   |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||               ||||||| ||||||||||||||||||||||||||   G   ACUUUUGGCUACAGCGAUUCGU AAUGUUGUAGCUAAAAGUUUAUUGGCUACAAUUU               UAAAAUU UAGCUAAUAAACUUUUGGCUACAACA   C AA                      A                                  GACUUACAAUCACAC       C                          AUU
Stem-loop sequence	UGAAAACUGAUGUCGUUAAGCACUUACAACAUCGGUUUUCAAGUAACCGAUGUUAAAAUAAUUCAGUUUUAACAUCGAUUAUUUGAAAACCGAUGUUGUAAGUGCUUAACAACAUCGGUUUUCAAAUAAUCGAUCUUAAAAUCACACUAACAUUCAGUUUAACAUCGGUUAUUUGAAAAUCGAUGUUGUAAAUGCUUAGCGACAUCGGUUUUCAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014769994.1	ncRNA:24   UCACGAAUUGCUGUAGUCAAAAGU   1   *****||||=|||||||||||||= targets:80   UAAAAUUAAUGACAUCAGUUUUCG   103 Target Full Sequence	2.0	PREDICTED: Glycine max vignain-like (LOC100806581), mRNA	vignain-like(LOC100806581)	coding protein	psRNATarget