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BaseInfo

ncRNA ID	novel_gma_miR1533
Species	Glycine max
Class	miRNA
Genome position	Chr19:46344035-46344111 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451646;SRR1451605
Length	21
Mature sequence(if miRNA)	1 - UUAAGUGCAUGAGUUGAUUUU - 21
Stem-loop(if miRNA)	--                 C        GAUAUGAUAA   AAUCAACUUAUGCACUU AACUUUUG          A   ||||||||||||||||| ||||||||          U   UUAGUUGAGUACGUGAA UUGAAAAC          G UU                 U        AUCUUCGAGA
Stem-loop sequence	AAUCAACUUAUGCACUUCAACUUUUGGAUAUGAUAAAUGAGAGCUUCUACAAAAGUUUAAGUGCAUGAGUUGAUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT094855.1	ncRNA:21   UUUUAGUUGAGUACGUGAAUU   1   ||||||||||=|||||||||| targets:22   AAAAUCAACUUAUGCACUUAA   42 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-6E24 unknown mRNA	NA	coding protein	psRNATarget
BT095764.1	ncRNA:21   UUUUAGUUGAGUACGUGAAUU   1   ||||||||||=|||||||||| targets:1001   AAAAUCAACUUAUGCACUUAA   1021 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-15K19 unknown mRNA	NA	coding protein	psRNATarget
XM_003518975.3	ncRNA:21   UUUUAGUUGAGUACGUGAAUU   1   ||||||||||=|||||||||| targets:1051   AAAAUCAACUUAUGCACUUAA   1071 Target Full Sequence	1.5	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X3, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006574485.2	ncRNA:21   UUUUAGUUGAGUACGUGAAUU   1   ||||||||||=|||||||||| targets:1072   AAAAUCAACUUAUGCACUUAA   1092 Target Full Sequence	1.5	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X2, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_006574484.2	ncRNA:21   UUUUAGUUGAGUACGUGAAUU   1   ||||||||||=|||||||||| targets:1084   AAAAUCAACUUAUGCACUUAA   1104 Target Full Sequence	1.5	PREDICTED: Glycine max binding partner of ACD11 1 (LOC100805907), transcript variant X1, mRNA	binding partner of ACD11 1(LOC100805907)	coding protein	psRNATarget
XM_014764118.1	ncRNA:21   UUUUAGUUGAGUACGUGAAUU   1   |||||||||||||||||||*| targets:971   AAAAUCAACUCAUGCACUUUA   991 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100779185 (LOC100779185), transcript variant X3, mRNA	uncharacterized LOC100779185(LOC100779185)	coding protein	psRNATarget
XM_006574366.2	ncRNA:21   UUUUAGUUGAGUACGUGAAUU   1   |||||||=||=|||||||||| targets:1335   AAAAUCAGCUUAUGCACUUAA   1355 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798622 (LOC100798622), transcript variant X1, mRNA	uncharacterized LOC100798622(LOC100798622)	coding protein	psRNATarget