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BaseInfo

ncRNA ID novel_gma_miR1523
Species Glycine max
Class miRNA
Genome position Chr1:42014061-42014236 [-]
Reference genome Glycine_max_v2.0
Source SRR1451646
Length 24
Mature sequence(if miRNA) 153 - UCACGACCGUCUUAGAAAGCCAGG - 176
Stem-loop(if miRNA) --                                   U       A     AAC     A   A  CA     -       AG  C  A
  UCACGACCGUCUUAGAAAGCCAGGCUUCAAAGACG UGUUGAC UCACG   GUCUU GAA GU  GGCUU CUAAGAC  UG UG C
  ||||||||||||||||||||||||||||||||||| ||||||| |||||   ||||| ||| ||  ||||| |||||||  || ||
  AGUGCUGGCAGAAUCUUUUGGUCCGAAGUUUCUGC ACAACUG AGUGC   CAGAA CUU CA  CCGAA GAUUCUG  AC GC G
GU                                   C       C     CGA     A   C  -A     A       CA  A  U
Stem-loop sequence UCACGACCGUCUUAGAAAGCCAGGCUUCAAAGACGUUGUUGACAUCACGAACGUCUUAGAAAGUCAGGCUUCUAAGACAGUGCUGACGUCGACAACGUCUUAGAAAGCCAACCUUCAAAGACAGCCGUGACGUCAACACCGUCUUUGAAGCCUGGUUUUCUAAGACGGUCGUGAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766623.1
ncRNA:24   GGACCGAAAGAUUCUGCCAGCACU   1
  **||||*|||||||||||||||*|
targets:3158   GGUGGCAUUCUAAGACGGUCGUAA   3181

2.5 PREDICTED: Glycine max putative multidrug resistance protein (LOC106795741), mRNA putative multidrug resistance protein(LOC106795741) coding protein psRNATarget
XM_006595284.2
ncRNA:24   GGACCGAAAGAUUCUGCCAGCACU   1
  **||||*|||||||||||||||*|
targets:3033   GGUGGCAUUCUAAGACGGUCGUAA   3056

2.5 PREDICTED: Glycine max putative multidrug resistance protein (LOC102669282), mRNA putative multidrug resistance protein(LOC102669282) coding protein psRNATarget