ncRNA ID | novel_gma_miR1523 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:42014061-42014236 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451646 |
Length | 24 |
Mature sequence(if miRNA) | 153 - UCACGACCGUCUUAGAAAGCCAGG - 176 |
Stem-loop(if miRNA) |
--                                   U       A     AAC     A   A  CA     -       AG  C  A   UCACGACCGUCUUAGAAAGCCAGGCUUCAAAGACG UGUUGAC UCACG   GUCUU GAA GU  GGCUU CUAAGAC  UG UG C   ||||||||||||||||||||||||||||||||||| ||||||| |||||   ||||| ||| ||  ||||| |||||||  || ||   AGUGCUGGCAGAAUCUUUUGGUCCGAAGUUUCUGC ACAACUG AGUGC   CAGAA CUU CA  CCGAA GAUUCUG  AC GC G GU                                   C       C     CGA     A   C  -A     A       CA  A  U |
Stem-loop sequence | UCACGACCGUCUUAGAAAGCCAGGCUUCAAAGACGUUGUUGACAUCACGAACGUCUUAGAAAGUCAGGCUUCUAAGACAGUGCUGACGUCGACAACGUCUUAGAAAGCCAACCUUCAAAGACAGCCGUGACGUCAACACCGUCUUUGAAGCCUGGUUUUCUAAGACGGUCGUGAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766623.1 |
|
2.5 | PREDICTED: Glycine max putative multidrug resistance protein (LOC106795741), mRNA | putative multidrug resistance protein(LOC106795741) | coding protein | psRNATarget | |||||||||
XM_006595284.2 |
|
2.5 | PREDICTED: Glycine max putative multidrug resistance protein (LOC102669282), mRNA | putative multidrug resistance protein(LOC102669282) | coding protein | psRNATarget |