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BaseInfo

ncRNA ID novel_gma_miR1517
Species Glycine max
Class miRNA
Genome position Chr18:17798675-17798888 [+]
Reference genome Glycine_max_v2.0
Source SRR1451646;SRR1451648;SRR1451649;SRR1451653;SRR1451654;SRR1451660;SRR1451662;SRR1451663;SRR1295525;SRR1295526;SRR1451607;SRR1451621
Length 24
Mature sequence(if miRNA) 1 - AUGUAAGAACCGUCUUAGAAGAGA - 24
Stem-loop(if miRNA) --                       A  C       U                                         A    A              AC      A
  AUGUAAGAACCGUCUUAGAAGAG CA AUUCUAA ACGGUUGUUAUGUAAAAAUCGUCUUAGAAGAGACACAUUCU GGAC GUUGUUAUGUAAAA  UGUCUU G
  ||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||||
  UACAUUCUUGGCAGAAUCUUCUC GU UAAGAUU UGCCAACAAUACAUUUUUGGUAGAAUCUUCUCUGUGUAAGA UCUG CAAUAAUACAUUUU  ACAGAG A
AA                       C  A       C                                         A    C              AC      A
Stem-loop sequence AUGUAAGAACCGUCUUAGAAGAGACACAUUCUAAUACGGUUGUUAUGUAAAAAUCGUCUUAGAAGAGACACAUUCUAGGACAGUUGUUAUGUAAAAACUGUCUUAGAAGAGACACAUUUUACAUAAUAACCGUCUAAGAAUGUGUCUCUUCUAAGAUGGUUUUUACAUAACAACCGUCUUAGAAUAUGCCUCUUCUAAGACGGUUCUUACAUAA