Search result

BaseInfo

ncRNA ID novel_gma_miR1509
Species Glycine max
Class miRNA
Genome position Chr17:4626839-4627036 [+]
Reference genome Glycine_max_v2.0
Source SRR1451646;SRR1451663;SRR1295517;SRR1451608
Length 23
Mature sequence(if miRNA) 176 - CGACAAGUAGUAAAAAUGAAACU - 198
Stem-loop(if miRNA) --         -     CC C        A          A                  A                CC  UU     AUUAUCACCUUUAA     U
  UUUUAUUUU AUUAU  G UGUUAGUC UUUUUUGUUA GUGAUGACAUGACAAGCG AGUAUCACGUUAUCAC  UC  GUCAU              UGACA A
  ||||||||| |||||  | |||||||| |||||||||| |||||||||||||||||| ||||||||||||||||  ||  |||||              |||||
  AAAGUAAAA UGAUG  C GCAAUCAG AAAAGGCAAU CACUAUUGUACUGUUUGU UUAUAGUGUAGUAGUG  AG  UAGUA              ACUGU C
UC         A     AA A        C          C                  C                CA  -U     --------------     G
Stem-loop sequence UUUUAUUUUAUUAUCCGCUGUUAGUCAUUUUUUGUUAAGUGAUGACAUGACAAGCGAAGUAUCACGUUAUCACCCUCUUGUCAUAUUAUCACCUUUAAUGACAUACGUGUCAAUGAUUGAACGUGAUGAUGUGAUAUUCUGUUUGUCAUGUUAUCACCUAACGGAAAACGACUAACGACAAGUAGUAAAAAUGAAACU