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BaseInfo

ncRNA ID	novel_gma_miR1506
Species	Glycine max
Class	miRNA
Genome position	Chr16:9906346-9906430 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451646;SRR835771;SRR1451605;SRR1451607
Length	21
Mature sequence(if miRNA)	1 - UUCCUUAGGCAGAAUGAUGAC - 21
Stem-loop(if miRNA)	-UA       -C       ------UA          -C    AUG    AUUAUUC  CUUAAGG        GUUGUCUGGU  UGUU   C    |||||||  |||||||        ||||||||||  ||||    UAGUAAG  GGAUUCC        CAACAGACUA  ACAA   A CAG       AC       UUUUGGAA          AA    GGA
Stem-loop sequence	UAAUUAUUCCCUUAAGGUAGUUGUCUGGUCUGUUAUGCAAGGAACAAAAUCAGACAACAAGGUUUUCCUUAGGCAGAAUGAUGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003529422.3	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   *|||*|||||||||||||||| targets:536   UUCAGCAUUCUGCCUAAGGAA   556 Target Full Sequence	1.0	PREDICTED: Glycine max ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like (LOC100818113), mRNA	ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like(LOC100818113)	coding protein	psRNATarget
XM_003556720.3	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   *|||*|=|||||||||||||| targets:616   UUCAGCGUUCUGCCUAAGGAA   636 Target Full Sequence	2.0	PREDICTED: Glycine max ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like (LOC100801721), mRNA	ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like(LOC100801721)	coding protein	psRNATarget
XM_014773104.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:181   GUCGUCAUUUUGCCUAAGGAA   201 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102667191 (LOC102667191), partial mRNA	uncharacterized LOC102667191(LOC102667191)	coding protein	psRNATarget
XM_006588116.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:58   GUCGUCAUUUUGCCUAAGGAA   78 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102662614 (LOC102662614), mRNA	uncharacterized LOC102662614(LOC102662614)	coding protein	psRNATarget
XM_006593076.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:181   GUCGUCAUUUUGCCUAAGGAA   201 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102660366 (LOC102660366), mRNA	uncharacterized LOC102660366(LOC102660366)	coding protein	psRNATarget
XM_014764183.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:1457   GUCGUCAUUUUGCCUAAGGAA   1477 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102661716 (LOC102661716), transcript variant X2, mRNA	uncharacterized LOC102661716(LOC102661716)	coding protein	psRNATarget
XM_006591223.2	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:1421   GUCGUCAUUUUGCCUAAGGAA   1441 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102661716 (LOC102661716), transcript variant X3, mRNA	uncharacterized LOC102661716(LOC102661716)	coding protein	psRNATarget
XM_014764182.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:1457   GUCGUCAUUUUGCCUAAGGAA   1477 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102661716 (LOC102661716), transcript variant X1, mRNA	uncharacterized LOC102661716(LOC102661716)	coding protein	psRNATarget
XM_014779275.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:2018   GUCGUCAUUUUGCCUAAGGAA   2038 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X7, mRNA	uncharacterized LOC100792767(LOC100792767)	coding protein	psRNATarget
AB934276.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:1983   GUCGUCAUUUUGCCUAAGGAA   2003 Target Full Sequence	2.5	Glycine max GmTNP3a mRNA for transposase, complete cds, strain: L72-2040	NA	coding protein	psRNATarget
AB934277.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:1980   GUCGUCAUUUUGCCUAAGGAA   2000 Target Full Sequence	2.5	Glycine max GmTNP3b mRNA for transposase, complete cds, strain: L72-2040	NA	coding protein	psRNATarget
XM_014779274.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:2018   GUCGUCAUUUUGCCUAAGGAA   2038 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X6, mRNA	uncharacterized LOC100792767(LOC100792767)	coding protein	psRNATarget
XM_014779273.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:1971   GUCGUCAUUUUGCCUAAGGAA   1991 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X5, mRNA	uncharacterized LOC100792767(LOC100792767)	coding protein	psRNATarget
XM_014779270.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:2018   GUCGUCAUUUUGCCUAAGGAA   2038 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X2, mRNA	uncharacterized LOC100792767(LOC100792767)	coding protein	psRNATarget
XM_014779271.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:2139   GUCGUCAUUUUGCCUAAGGAA   2159 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X3, mRNA	uncharacterized LOC100792767(LOC100792767)	coding protein	psRNATarget
XM_014763083.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:3529   GUCGUCAUUUUGCCUAAGGAA   3549 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106794966 (LOC106794966), transcript variant X2, mRNA	uncharacterized LOC106794966(LOC106794966)	coding protein	psRNATarget
XM_014779272.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:3161   GUCGUCAUUUUGCCUAAGGAA   3181 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100792767 (LOC100792767), transcript variant X4, mRNA	uncharacterized LOC100792767(LOC100792767)	coding protein	psRNATarget
AB934278.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:3972   GUCGUCAUUUUGCCUAAGGAA   3992 Target Full Sequence	2.5	Glycine max GmTNP4a mRNA for transposase, complete cds, strain: L72-2040	NA	coding protein	psRNATarget
AB934279.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||=||||||||||| targets:3972   GUCGUCAUUUUGCCUAAGGAA   3992 Target Full Sequence	2.5	Glycine max GmTNP4b mRNA for transposase, complete cds, strain: L72-2040	NA	coding protein	psRNATarget
XM_006589806.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   ||||||*||=||||||||||| targets:64   GUCAUCCUUUUGCCUAAGGAA   84 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC102663555 (LOC102663555), mRNA	uncharacterized LOC102663555(LOC102663555)	coding protein	psRNATarget
XM_014770450.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||||*||||||||| targets:781   GUCGUCAUUCUACCUAAGGAA   801 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106796841 (LOC106796841), mRNA	uncharacterized LOC106796841(LOC106796841)	coding protein	psRNATarget
XM_014767501.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |||=|||||||*||||||||| targets:1039   GUCGUCAUUCUACCUAAGGAA   1059 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106796055 (LOC106796055), partial mRNA	uncharacterized LOC106796055(LOC106796055)	coding protein	psRNATarget
XM_006579061.1	ncRNA:21   CAGUAGUAAGACGGAUUCCUU   1   |*|=|||||=||||||||||| targets:181   GCCGUCAUUUUGCCUAAGGAA   201 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100776377 (LOC100776377), mRNA	uncharacterized LOC100776377(LOC100776377)	coding protein	psRNATarget