ncRNA ID | novel_gma_miR1503 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:50112978-50113175 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451646 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CGUUACCAAGUGAUGUUGAUCGCC - 24 |
Stem-loop(if miRNA) |
--                      C     G                      C                        AUGUCAAC  CAUGGAAGAUGAAA   CGUUACCAAGUGAUGUUGAUCG CACGU UCACGUUCUUAUUGGAUGAUGA UGUCAUGUGUCAUGUUUUGAUUGG        UC              U   |||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||        ||   GCAAUGGUUCACUACAACUGGC GUGCA AGUGCAAGAAUAACCUACUACU ACAGUGUACAGUACAAGACUAACC        UU              G UG                      A     G                      A                        ------AG  AUUUUUGUUGUUAC |
Stem-loop sequence | CGUUACCAAGUGAUGUUGAUCGCCACGUGUCACGUUCUUAUUGGAUGAUGACUGUCAUGUGUCAUGUUUUGAUUGGAUGUCAACUCCAUGGAAGAUGAAAUGCAUUGUUGUUUUUAUUGACCAAUCAGAACAUGACAUGUGACAAUCAUCAUCCAAUAAGAACGUGAGACGUGACGGUCAACAUCACUUGGUAACGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006602607.2 |
|
1.5 | PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA | transcription factor TGA7-like(LOC100794752) | coding protein | psRNATarget | |||||||||
XM_014778000.1 |
|
2.0 | PREDICTED: Glycine max pentatricopeptide repeat-containing protein At3g09060 (LOC100819721), mRNA | pentatricopeptide repeat-containing protein At3g09060(LOC100819721) | coding protein | psRNATarget |