Search result

BaseInfo

ncRNA ID novel_gma_miR1498
Species Glycine max
Class miRNA
Genome position Chr15:45041318-45041536 [-]
Reference genome Glycine_max_v2.0
Source SRR1451646;SRR1451664
Length 24
Mature sequence(if miRNA) 196 - AUUAACAUCGGUUUUGUACAAAAC - 219
Stem-loop(if miRNA) --              U                                                                                          UA
  AUUAACAUCGGUUU GUACAAAACCGAUGUUAAGUUAAACGCGGUGGCAUAUUUGUAAAUAAAGUAUCAUUCUUAACAUCGGUUUUCCAAAAAAUCGAUGUUAAC  A
  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  U
  UAAUUGUAGCCAAA CAUGUUUUGGCUACAAUUCAAUUUGCGCCACCGUAUAAACAUUUAUUUCAUAGUAAGAAUUGUAGCCAAAAGGUUUUUUGGCUACAAUUG  G
AA              U                                                                                          UA
Stem-loop sequence AUUAACAUCGGUUUUGUACAAAACCGAUGUUAAGUUAAACGCGGUGGCAUAUUUGUAAAUAAAGUAUCAUUCUUAACAUCGGUUUUCCAAAAAAUCGAUGUUAACUAAUGAUGUUAACAUCGGUUUUUUGGAAAACCGAUGUUAAGAAUGAUACUUUAUUUACAAAUAUGCCACCGCGUUUAACUUAACAUCGGUUUUGUACUAAACCGAUGUUAAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762963.1
ncRNA:24   CAAAACAU-GUUUUGGCUACAAUUA   1
  |||**|*|-||||||||||||||||
targets:278   GUUACGAAUCAAAACCGAUGUUAAU   302

3.0 PREDICTED: Glycine max uncharacterized LOC100794765 (LOC100794765), mRNA uncharacterized LOC100794765(LOC100794765) coding protein psRNATarget