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BaseInfo

ncRNA ID novel_gma_miR1495
Species Glycine max
Class miRNA
Genome position Chr10:50684930-50685025 [+]
Reference genome Glycine_max_v2.0
Source SRR1451646;SRR1451618
Length 21
Mature sequence(if miRNA) 1 - UUUAUACGGAUGAACUACAUC - 21
Stem-loop(if miRNA) --                    C    A       ---------       A
  UUUAUACGGAUGAACUACAU CGUA GUUGUAU         ACGGAUG A
  |||||||||||||||||||| |||| |||||||         ||||||| G
  AAGUAUGCCUACUUGAUGUA GUAU CAACAUG         UGUUUAC U
CU                    A    A       AAGCAUGAA       A
Stem-loop sequence UUUAUACGGAUGAACUACAUCCGUAAGUUGUAUACGGAUGAAGUACAUUUGUAAGUACGAAGUACAACAUAUGAAUGUAGUUCAUCCGUAUGAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776929.1
ncRNA:21   CUACAUCAAGUAGGCAUAUUU   1
  *=|*|||||||||=|||||||
targets:1531   AGUAUAGUUCAUCUGUAUAAA   1551

2.5 PREDICTED: Glycine max DNA-directed RNA polymerase IV subunit 1-like (LOC100810483), transcript variant X2, mRNA DNA-directed RNA polymerase IV subunit 1-like(LOC100810483) coding protein psRNATarget
XM_006573692.2
ncRNA:21   CUACAUCAAGUAGGCAUAUUU   1
  *=|*|||||||||=|||||||
targets:1531   AGUAUAGUUCAUCUGUAUAAA   1551

2.5 PREDICTED: Glycine max DNA-directed RNA polymerase IV subunit 1-like (LOC100810483), transcript variant X1, mRNA DNA-directed RNA polymerase IV subunit 1-like(LOC100810483) coding protein psRNATarget