ncRNA ID | novel_gma_miR1495 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:50684930-50685025 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451646;SRR1451618 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUAUACGGAUGAACUACAUC - 21 |
Stem-loop(if miRNA) |
--                    C    A       ---------       A   UUUAUACGGAUGAACUACAU CGUA GUUGUAU         ACGGAUG A   |||||||||||||||||||| |||| |||||||         ||||||| G   AAGUAUGCCUACUUGAUGUA GUAU CAACAUG         UGUUUAC U CU                    A    A       AAGCAUGAA       A |
Stem-loop sequence | UUUAUACGGAUGAACUACAUCCGUAAGUUGUAUACGGAUGAAGUACAUUUGUAAGUACGAAGUACAACAUAUGAAUGUAGUUCAUCCGUAUGAAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014776929.1 |
|
2.5 | PREDICTED: Glycine max DNA-directed RNA polymerase IV subunit 1-like (LOC100810483), transcript variant X2, mRNA | DNA-directed RNA polymerase IV subunit 1-like(LOC100810483) | coding protein | psRNATarget | |||||||||
XM_006573692.2 |
|
2.5 | PREDICTED: Glycine max DNA-directed RNA polymerase IV subunit 1-like (LOC100810483), transcript variant X1, mRNA | DNA-directed RNA polymerase IV subunit 1-like(LOC100810483) | coding protein | psRNATarget |