ncRNA ID | novel_gma_miR1492 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:32464356-32464416 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294480;SRR1451652;SRR1451657;SRR1451658;SRR1294484;SRR1451662;SRR1294485;SRR2045228;SRR1295516;SRR1295517;SRR835763;SRR1295518;SRR835767;SRR1295519;SRR1295520;SRR1295521;SRR1295524;SRR1295525;SRR1295526;SRR1295527;SRR1295530;SRR1451604;SRR1451606;SRR1292928;SRR1292929;SRR1451610;SRR1451615;SRR1451619;SRR1294476;SRR1451621;SRR1451623 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CAUUAGAAUCGAUGUAGAAGGCCU - 24 |
Stem-loop(if miRNA) |
--   -       G   U     GC UUUUU   CAU UAGAAUC AUG AGAAG  C     U   ||| ||||||| ||| |||||  |     U   GUA GUUUUAG UAC UCUUC  G     A GU   C       A   -     UA UGAUG |
Stem-loop sequence | CAUUAGAAUCGAUGUAGAAGGCCUUUUUUUAGUAGUGAUCUUCUCAUAGAUUUUGCAUGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003539359.3 |
|
1.5 | PREDICTED: Glycine max MLO-like protein 6 (LOC100776714), mRNA | MLO-like protein 6(LOC100776714) | coding protein | psRNATarget | |||||||||
XM_006588741.2 |
|
2.5 | PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102670366), transcript variant X2, mRNA | phosphoinositide phosphatase SAC1-like(LOC102670366) | coding protein | psRNATarget | |||||||||
XM_014763017.1 |
|
2.5 | PREDICTED: Glycine max phosphoinositide phosphatase SAC1-like (LOC102660101), transcript variant X1, mRNA | phosphoinositide phosphatase SAC1-like(LOC102660101) | coding protein | psRNATarget |