Search result

BaseInfo

ncRNA ID	novel_gma_miR1491
Species	Glycine max
Class	miRNA
Genome position	Chr15:13144842-13144928 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451646
Length	21
Mature sequence(if miRNA)	67 - AAUGAGAAAAUCAAUGGUCGA - 87
Stem-loop(if miRNA)	--A UG              C      AUAU      G A   C    A  AGAAAAUCAAUGGU GAUAUU    GCACAU C UAA A    |  |||||||||||||| ||||||    |||||| | |||    U  UUUUUUAGUUAUCA CUAUAA    UGUGUA G AUU A AAC GU              A      -GGU      A C   A
Stem-loop sequence	AAUGAGAAAAUCAAUGGUCGAUAUUAUAUGCACAUGCAUAACAAAUUACGAAUGUGUUGGAAUAUCAACUAUUGAUUUUUUUGUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006606036.2	ncRNA:21   AGCUGGUAACUAAAAGAGUAA   1   ***||||||||*||||||||| targets:114   AAAACCAUUGACUUUCUCAUU   134 Target Full Sequence	2.5	PREDICTED: Glycine max homeobox-leucine zipper protein ANTHOCYANINLESS 2 (LOC100785102), transcript variant X4, mRNA	homeobox-leucine zipper protein ANTHOCYANINLESS 2(LOC100785102)	coding protein	psRNATarget
XM_014774128.1	ncRNA:21   AGCUGGUAACUAAAAGAGUAA   1   |*||=||*||||||||||||* targets:520   UGGAUCACUGAUUUUCUCAUC   540 Target Full Sequence	3.0	PREDICTED: Glycine max endoglucanase 2-like (LOC106798162), mRNA	endoglucanase 2-like(LOC106798162)	coding protein	psRNATarget
AK244066.1	ncRNA:21   AGCUGGUAACUAAAAGAGUAA   1   |*||=||*||||||||||||* targets:752   UGGAUCACUGAUUUUCUCAUC   772 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-02-A02	NA	coding protein	psRNATarget
XM_003527638.3	ncRNA:21   AGCUGGUAACUAAAAGAGUAA   1   |*||=||*||||||||||||* targets:819   UGGAUCACUGAUUUUCUCAUC   839 Target Full Sequence	3.0	PREDICTED: Glycine max endoglucanase 2 (LOC100812226), mRNA	endoglucanase 2(LOC100812226)	coding protein	psRNATarget