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BaseInfo

ncRNA ID	novel_gma_miR1487
Species	Glycine max
Class	miRNA
Genome position	Chr17:7222188-7222335 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1294480;SRR1451624
Length	24
Mature sequence(if miRNA)	125 - AAUAAAAACGUGAUAUGUGACAGU - 148
Stem-loop(if miRNA)	--C            A            A     CAA         CA           ------        U  U    GUCACGUGUCGC UUUUUAUUGGAC UUGAU   CAUGUGUCG  AUUUUAUUGGA      UGUUAAUU UG G    |||||||||||| |||||||||||| |||||   |||||||||  |||||||||||      |||||||| ||    CAGUGUAUAGUG AAAAAUAACCUG AAUUG   GUGCACAGU  UAAAAUAACCU      GUAAUUAA GC C UGA            C            A     ACA         AC           CUAACU        U  A
Stem-loop sequence	CGUCACGUGUCGCAUUUUUAUUGGACAUUGAUCAACAUGUGUCGCAAUUUUAUUGGAUGUUAAUUUUGUGCACGUAAUUAAUGUCAAUCUCCAAUAAAAUCAUGACACGUGACAGUUAAAGUCCAAUAAAAACGUGAUAUGUGACAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006602607.2	ncRNA:24   UGACAGUGUAUAGUGCAAAAAUAA   1   ||||||||=|=||||||||||||| targets:534   ACUGUCACGUGUCACGUUUUUAUU   557 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA	transcription factor TGA7-like(LOC100794752)	coding protein	psRNATarget
XM_003529834.3	ncRNA:24   UGACAGUGUAUAGUGCAAAAAUAA   1   ||*|||||=|=||||||||||||| targets:2007   ACGGUCACGUGUCACGUUUUUAUU   2030 Target Full Sequence	2.0	PREDICTED: Glycine max laccase-6-like (LOC100789406), transcript variant X2, mRNA	laccase-6-like(LOC100789406)	coding protein	psRNATarget
XM_014777738.1	ncRNA:24   UGACAGUGUAUAGUGCAAAAAUAA   1   ||*|||||=|=||||||||||||| targets:2152   ACGGUCACGUGUCACGUUUUUAUU   2175 Target Full Sequence	2.0	PREDICTED: Glycine max laccase-6-like (LOC100789406), transcript variant X1, mRNA	laccase-6-like(LOC100789406)	coding protein	psRNATarget
AK245140.1	ncRNA:24   UGAC----AGUGUAUAGUGCAAAAAUAA   1   ==||----||||||=||||*|||||||| targets:1472   GUUGAUAAUCACAUGUCACCUUUUUAUU   1499 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-21-P01	NA	coding protein	psRNATarget
XM_006586271.2	ncRNA:24   UGACAGUGUAUAGUGCAAAAAUAA   1   |=||-||||*|||||||*|||||| targets:2620   AUUG-CACAAAUCACGUGUUUAUU   2642 Target Full Sequence	2.5	PREDICTED: Glycine max histidine--tRNA ligase, cytoplasmic-like (LOC100777684), mRNA	histidine--tRNA ligase, cytoplasmic-like(LOC100777684)	coding protein	psRNATarget
XM_003553015.3	ncRNA:24   UGACAGUGUAUAGUGCAAAAAUAA   1   *=|*||||||*||||*|||||||| targets:3049   UUUAUCACAUUUCACUUUUUUAUU   3072 Target Full Sequence	2.5	PREDICTED: Glycine max disease resistance protein RPM1-like (LOC100782760), transcript variant X1, mRNA	disease resistance protein RPM1-like(LOC100782760)	coding protein	psRNATarget
XM_006602127.2	ncRNA:24   UGACAGUGUAUAGUGCAAAAAUAA   1   *=|*||||||*||||*|||||||| targets:3065   UUUAUCACAUUUCACUUUUUUAUU   3088 Target Full Sequence	2.5	PREDICTED: Glycine max disease resistance protein RPM1-like (LOC100782760), transcript variant X2, mRNA	disease resistance protein RPM1-like(LOC100782760)	coding protein	psRNATarget