ncRNA ID | novel_gma_miR1486 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:18731698-18731818 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451646;SRR1451652;SRR1451604;SRR1451609 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUAAAAUGUAAACUUCAGAGACU - 24 |
Stem-loop(if miRNA) |
AA   -        C          C         C A   C     U           C   UCU UGAAGUUU CAUUUUAAUU CUAAAAGGU C UUC GUUAA AUUUUUUAACU U   ||| |||||||| |||||||||| ||||||||| | ||| ||||| |||||||||||   AGA ACUUCAAA GUAAAAUUAA GAUUUUCCA G AAG CAAUU UAAAAAAUUGA G UC   G        U          A         A A   C     U           U |
Stem-loop sequence | AAUCUUGAAGUUUCCAUUUUAAUUCCUAAAAGGUCCAUUCCGUUAAUAUUUUUUAACUCUGUAGUUAAAAAAUUUUAACCGAAAGAACCUUUUAGAAAUUAAAAUGUAAACUUCAGAGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006577048.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA | uncharacterized LOC100819268(LOC100819268) | coding protein | psRNATarget | |||||||||
XM_014773932.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA | uncharacterized LOC100819268(LOC100819268) | coding protein | psRNATarget |