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BaseInfo

ncRNA ID novel_gma_miR1486
Species Glycine max
Class miRNA
Genome position Chr13:18731698-18731818 [-]
Reference genome Glycine_max_v2.0
Source SRR1451646;SRR1451652;SRR1451604;SRR1451609
Length 24
Mature sequence(if miRNA) 1 - AUUAAAAUGUAAACUUCAGAGACU - 24
Stem-loop(if miRNA) AA   -        C          C         C A   C     U           C
  UCU UGAAGUUU CAUUUUAAUU CUAAAAGGU C UUC GUUAA AUUUUUUAACU U
  ||| |||||||| |||||||||| ||||||||| | ||| ||||| |||||||||||
  AGA ACUUCAAA GUAAAAUUAA GAUUUUCCA G AAG CAAUU UAAAAAAUUGA G
UC   G        U          A         A A   C     U           U
Stem-loop sequence AAUCUUGAAGUUUCCAUUUUAAUUCCUAAAAGGUCCAUUCCGUUAAUAUUUUUUAACUCUGUAGUUAAAAAAUUUUAACCGAAAGAACCUUUUAGAAAUUAAAAUGUAAACUUCAGAGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006577048.2
ncRNA:24   UCAGAGACUUCAAAUGUAAAAUUA   1
  ||||*||**|||||||||||||||
targets:1927   AGUCCCUAUAGUUUACAUUUUAAU   1950

2.0 PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA uncharacterized LOC100819268(LOC100819268) coding protein psRNATarget
XM_014773932.1
ncRNA:24   UCAGAGACUUCAAAUGUAAAAUUA   1
  ||||*||**|||||||||||||||
targets:2037   AGUCCCUAUAGUUUACAUUUUAAU   2060

2.0 PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA uncharacterized LOC100819268(LOC100819268) coding protein psRNATarget