ncRNA ID | novel_gma_miR1480 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:19747170-19747302 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451646 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGAAAACUGAUGUCGUUAAGCACU - 24 |
Stem-loop(if miRNA) |
--      C          A                                       -----    A   UGAAAA UGAUGUCGUU AGCACUUACAACAUCGGUUUUCAAAUAACCGAUGUUAAA     ACUG A   |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     ||||   AUUUUU GCUACAGCAA UUGUGAAUGUUGUAGCCAAAAGUUUAUUGGCUACAAUUU     UGAU U AA      A          C                                       UAGUG    U |
Stem-loop sequence | UGAAAACUGAUGUCGUUAAGCACUUACAACAUCGGUUUUCAAAUAACCGAUGUUAAAACUGAAUUUAGUGUGAUUUUAACAUCGGUUAUUUGAAAACCGAUGUUGUAAGUGUUCAACGACAUCGAUUUUUAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014769994.1 |
|
2.0 | PREDICTED: Glycine max vignain-like (LOC100806581), mRNA | vignain-like(LOC100806581) | coding protein | psRNATarget |