ncRNA ID | novel_gma_miR1457 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:4763702-4763806 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451645 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUAUUUCCUGUUUUCAUUUUCACU - 24 |
Stem-loop(if miRNA) |
--      C                       GUUU    AAAUCUAACCAAA   UUAUUU CUGUUUUCAUUUUCACUGAAAAU    UUAG             C   |||||| |||||||||||||||||||||||    ||||   AAUAAA GACAAAAGUAAAAGUGACUUUUG    UUUG             A CC      A                       -UCU    CCACUACUUUUAC |
Stem-loop sequence | UUAUUUCCUGUUUUCAUUUUCACUGAAAAUGUUUUUAGAAAUCUAACCAAACACAUUUUCAUCACCGUUUUCUGUUUUCAGUGAAAAUGAAAACAGAAAAUAACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773757.1 |
|
2.5 | PREDICTED: Glycine max transcription factor bHLH27-like (LOC102668755), transcript variant X7, mRNA | transcription factor bHLH27-like(LOC102668755) | coding protein | psRNATarget | |||||||||
XM_003519761.2 |
|
2.5 | PREDICTED: Glycine max protein ALTERED XYLOGLUCAN 4-like (LOC100809648), transcript variant X2, mRNA | protein ALTERED XYLOGLUCAN 4-like(LOC100809648) | coding protein | psRNATarget |