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BaseInfo

ncRNA ID novel_gma_miR1457
Species Glycine max
Class miRNA
Genome position Chr6:4763702-4763806 [+]
Reference genome Glycine_max_v2.0
Source SRR1451645
Length 24
Mature sequence(if miRNA) 1 - UUAUUUCCUGUUUUCAUUUUCACU - 24
Stem-loop(if miRNA) --      C                       GUUU    AAAUCUAACCAAA
  UUAUUU CUGUUUUCAUUUUCACUGAAAAU    UUAG             C
  |||||| |||||||||||||||||||||||    ||||
  AAUAAA GACAAAAGUAAAAGUGACUUUUG    UUUG             A
CC      A                       -UCU    CCACUACUUUUAC
Stem-loop sequence UUAUUUCCUGUUUUCAUUUUCACUGAAAAUGUUUUUAGAAAUCUAACCAAACACAUUUUCAUCACCGUUUUCUGUUUUCAGUGAAAAUGAAAACAGAAAAUAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773757.1
ncRNA:24   UCACUUUUACUUUUGUCCUUUAUU   1
  |||||||||*|||||||||||*||
targets:2502   AGUGAAAAUAAAAACAGGAAACAA   2525

2.5 PREDICTED: Glycine max transcription factor bHLH27-like (LOC102668755), transcript variant X7, mRNA transcription factor bHLH27-like(LOC102668755) coding protein psRNATarget
XM_003519761.2
ncRNA:24   UCACUUUUACUUUUGUCCUUUAUU   1
  =**||||=||||||*|||||||||
targets:1026   GAAGAAAGUGAAAAAAGGAAAUAA   1049

2.5 PREDICTED: Glycine max protein ALTERED XYLOGLUCAN 4-like (LOC100809648), transcript variant X2, mRNA protein ALTERED XYLOGLUCAN 4-like(LOC100809648) coding protein psRNATarget