ncRNA ID | novel_gma_miR1454 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:7578193-7578273 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451645 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUAGAUUUUGGGUUUUGGUC - 20 |
Stem-loop(if miRNA) |
--     U         U               ----C   A   UUAGA UUUGGGUUU GGUCUAACUUAACCC     ACC A   ||||| ||||||||| |||||||||||||||     ||| G   AAUCU AAACUCAAA CCGGAUUGAGUUGGG     UGG U AG     U         C               AUGUU   U |
Stem-loop sequence | UUAGAUUUUGGGUUUUGGUCUAACUUAACCCCACCAAGUUGGUUUGUAGGGUUGAGUUAGGCCCAAACUCAAAUUCUAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014765461.1 |
|
2.5 | PREDICTED: Glycine max ABC transporter B family member 4-like (LOC100798707), transcript variant X2, mRNA | ABC transporter B family member 4-like(LOC100798707) | coding protein | psRNATarget | |||||||||
XM_003541282.3 |
|
2.5 | PREDICTED: Glycine max ABC transporter B family member 4-like (LOC100798707), transcript variant X1, mRNA | ABC transporter B family member 4-like(LOC100798707) | coding protein | psRNATarget | |||||||||
XM_003523546.3 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100808615 (LOC100808615), mRNA | uncharacterized LOC100808615(LOC100808615) | coding protein | psRNATarget |