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BaseInfo

ncRNA ID novel_gma_miR1452
Species Glycine max
Class miRNA
Genome position Chr2:7542833-7542934 [-]
Reference genome Glycine_max_v2.0
Source SRR1451645
Length 20
Mature sequence(if miRNA) 1 - UCAUGUAUGAUUGUAUGUCU - 20
Stem-loop(if miRNA) -AC       C                        --U   ----U      A
   UAUACAA UAUACAUGGAUGGUCAAAAUUAAG   UAG     GGUCUU C
   ||||||| ||||||||||||||||||||||||   |||     |||||| A
   GUAUGUU GUAUGUACUUAUCAGUUUUAAUUU   AUU     CCGGAA A
UCU       A                        UCU   UAUGU      A
Stem-loop sequence ACUAUACAACUAUACAUGGAUGGUCAAAAUUAAGUUAGUGGUCUUACAAAAAGGCCUGUAUUUAUCUUUUAAUUUUGACUAUUCAUGUAUGAUUGUAUGUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014765246.1
ncRNA:20   UCUGUAUGUUAGUAUGUACU   1
  |||||*|||||||||||||*
targets:1272   AGACAGACAAUCAUACAUGC   1291

2.0 PREDICTED: Glycine max putative wall-associated receptor kinase-like 16 (LOC106795446), mRNA putative wall-associated receptor kinase-like 16(LOC106795446) coding protein psRNATarget
XM_003550448.3
ncRNA:20   UCUGUAUGUUAGUAUGUACU   1
  **||||||||||||||||*|
targets:79   UUACAUACAAUCAUACAUCA   98

2.5 PREDICTED: Glycine max uncharacterized LOC100816043 (LOC100816043), mRNA uncharacterized LOC100816043(LOC100816043) coding protein psRNATarget
XM_006596186.2
ncRNA:20   UCUGUAUGUUAGUAUGUACU   1
  |||||*=||||||||||||*
targets:1000   AGACAGGCAAUCAUACAUGC   1019

3.0 PREDICTED: Glycine max putative wall-associated receptor kinase-like 16 (LOC100781051), mRNA putative wall-associated receptor kinase-like 16(LOC100781051) coding protein psRNATarget
XM_003534099.3
ncRNA:20   UCUG-UAUGUUAGUAUGUACU   1
  *|||-|*||||||||||||||
targets:1541   UGACCACACAAUCAUACAUGA   1561

3.0 PREDICTED: Glycine max uncharacterized GPI-anchored protein At4g28100-like (LOC100813726), mRNA uncharacterized GPI-anchored protein At4g28100-like(LOC100813726) coding protein psRNATarget
XM_014766814.1
ncRNA:20   UCUGUAUGUUAGUAUGUACU   1
  |||||**||||||||||||*
targets:374   AGACAACCAAUCAUACAUGC   393

3.0 PREDICTED: Glycine max putative wall-associated receptor kinase-like 16 (LOC106795885), mRNA putative wall-associated receptor kinase-like 16(LOC106795885) coding protein psRNATarget