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BaseInfo

ncRNA ID	novel_gma_miR1440
Species	Glycine max
Class	miRNA
Genome position	Chr1:41389697-41389839 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1294479;SRR2045230;SRR2045236;SRR1295517;SRR1294477;SRR1294478
Length	24
Mature sequence(if miRNA)	1 - ACCAAUCCGUGCCUCUUCCUCCUC - 24
Stem-loop(if miRNA)	--      C    C               C                     C    GC         C      ACCAAU CGUG CUCUUCCUCCUCUAC AGCUCAAUAUUUUUCCUUUCA CUUU  UUUUGUAAA UACA   |||||| |||| ||||||||||||||| ||||||||||||||||||||| ||||  ||||||||| |||C   UGGUUA GCAC GAGAAGGAGGAGAUG UCGAGUUAUAGAAAGGAAAGU GAAA  AAAACAUUU AUGU CG      A    A               A                     U    AC         A
Stem-loop sequence	ACCAAUCCGUGCCUCUUCCUCCUCUACCAGCUCAAUAUUUUUCCUUUCACCUUUGCUUUUGUAAACUACACUGUAAUUUACAAAACAAAAGUUGAAAGGAAAGAUAUUGAGCUAGUAGAGGAGGAAGAGACACGAAUUGGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014779469.1	ncRNA:24   CUCCUCCUUCUCCGUGCCUAACCA   1   ||||||||||||*||||||||||| targets:814   GAGGAGGAAGAGCCACGGAUUGGU   837 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_006586135.2	ncRNA:24   CUCCUCCUUCUCCGUGCCUAACCA   1   ||||||||||||*||||||||||| targets:814   GAGGAGGAAGAGCCACGGAUUGGU   837 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_006591670.1	ncRNA:24   CUCCUCCUUCUCCGUGCCUAACCA   1   ||||||||||||*||||||||||| targets:70   GAGGAGGAAGAGCCACGGAUUGGU   93 Target Full Sequence	1.5	PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA	glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828)	coding protein	psRNATarget