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BaseInfo

ncRNA ID	novel_gma_miR1429
Species	Glycine max
Class	miRNA
Genome position	Chr8:17451112-17451222 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451644
Length	21
Mature sequence(if miRNA)	1 - CUCUUUUCAGCACAUUCUUUU - 21
Stem-loop(if miRNA)	--            C            AG    A    ----------    U       U   CUCUUUUCAGCA AUUCUUUUAUUG  UAAA UUCA          UGAA CUCGUAU A   |||||||||||| ||||||||||||  |||| ||||          |||| ||||||| A   GAGAAAAGUUGU UAAGAAAAUAAC  AUUU AAGU          GCUU GAGUGUA A GU            A            GA    -    UUACCCUGUA    -       C
Stem-loop sequence	CUCUUUUCAGCACAUUCUUUUAUUGAGUAAAAUUCAUGAAUCUCGUAUUAAACAUGUGAGUUCGAUGUCCCAUUUGAAUUUAAGCAAUAAAAGAAUAUGUUGAAAAGAGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006574355.2	ncRNA:21   UUUUCUUACACGACUUUUCUC   1   |=|||||*||||||||||||| targets:47   AGAAGAAAGUGCUGAAAAGAG   67 Target Full Sequence	1.0	PREDICTED: Glycine max ribosome-recycling factor, chloroplastic-like (LOC100794560), transcript variant X1, mRNA	ribosome-recycling factor, chloroplastic-like(LOC100794560)	coding protein	psRNATarget
AK287213.1	ncRNA:21   UUUUCUUACACGACUUUUCUC   1   =||=|||*||||||||||||| targets:1494   GAAGGAAAGUGCUGAAAAGAG   1514 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-46-K21	NA	coding protein	psRNATarget
AK286083.1	ncRNA:21   UUUUCUUACACGACUUUUCUC   1   =||=|||*||||||||||||| targets:1512   GAAGGAAAGUGCUGAAAAGAG   1532 Target Full Sequence	2.0	Glycine max cDNA, clone: GMFL01-21-J11	NA	coding protein	psRNATarget
XM_003523274.3	ncRNA:21   UUUUCUUACACGACUUUUCUC   1   =||=|||*||||||||||||| targets:1511   GAAGGAAAGUGCUGAAAAGAG   1531 Target Full Sequence	2.0	PREDICTED: Glycine max probable 26S proteasome non-ATPase regulatory subunit 3 (LOC100787034), mRNA	probable 26S proteasome non-ATPase regulatory subunit 3(LOC100787034)	coding protein	psRNATarget
XM_003527484.3	ncRNA:21   UUUUCUUACACGACUUUUCUC   1   =||=|||*||||||||||||| targets:1519   GAAGGAAAGUGCUGAAAAGAG   1539 Target Full Sequence	2.0	PREDICTED: Glycine max probable 26S proteasome non-ATPase regulatory subunit 3 (LOC100814379), mRNA	probable 26S proteasome non-ATPase regulatory subunit 3(LOC100814379)	coding protein	psRNATarget
XM_006578378.2	ncRNA:21   UUUUCUUACACGACUUUUCUC   1   *|=||||||||||||*||||| targets:771   CAGAGAAUGUGCUGAUAAGAG   791 Target Full Sequence	2.5	PREDICTED: Glycine max protein kinase PINOID 2-like (LOC100787216), mRNA	protein kinase PINOID 2-like(LOC100787216)	coding protein	psRNATarget