ncRNA ID | novel_gma_miR1424 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:18442668-18442870 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451644;SRR1451647;SRR1451619;SRR1451627 |
Length | 24 |
Mature sequence(if miRNA) | 180 - AAUCGAUUACUAGAAUCUUGUAAU - 203 |
Stem-loop(if miRNA) |
--   C   --   U           CCAA  ---A    G      UAUUUU     -AA    ACAAAACUG          -GAU   U        C   CAG   UAC AGA  CUG GUAAUUGAUUA    AG    GUUU UGAAGA      UGACU   CGAA         UUUGAAUUUU    CUG GUAAUCGA UAC   A   ||| |||  ||| |||||||||||    ||    |||| ||||||      |||||   ||||         ||||||||||    ||| |||||||| |||   A   AUG UCU  GAU CAUUAGCUAAU    UC    UAAA ACUUCU      ACUGA   GUUU         AAAUUUAGAG    GAU UAUUAGCU AUG   U UA   U   AA   -           -AUG  AAUA    G      --CAGU     AAA    CCAAAACAA          AAGU   -        A   UAC |
Stem-loop sequence | UACCAGACUGUGUAAUUGAUUACCAAAGAGUUUGUGAAGAUAUUUUUGACUAACGAAACAAAACUGUUUGAAUUUUGAUCUGUGUAAUCGACUACCAGAAUCAUGUAAUCGAUUAUUAGUGAAGAGAUUUAAAAACAAAACCUUUGAAAAGUCAUGACUCUUCAGAAAUAUAACUGUAUAAUCGAUUACUAGAAUCUUGUAAU |