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BaseInfo

ncRNA ID novel_gma_miR1420
Species Glycine max
Class miRNA
Genome position Chr6:50786784-50786867 [-]
Reference genome Glycine_max_v2.0
Source SRR1451644;SRR1451608;SRR1451621
Length 24
Mature sequence(if miRNA) 61 - AUGGAUUGGACAAUCUGUAAGCCU - 84
Stem-loop(if miRNA) --        GA  --                UAAAUGA      U
  AUGGAUUG  CA  AUCUGUAAGCCUCAUA       GGCUUA A
  ||||||||  ||  ||||||||||||||||       |||||| G
  UACCUAAC  GU  UAGGCAUUCGGAGUAU       UCGAGU A
UA        AA  UA                -------      U
Stem-loop sequence AUGGAUUGGACAAUCUGUAAGCCUCAUAUAAAUGAGGCUUAUAGAUUGAGCUUAUGAGGCUUACGGAUAUUGAACAAUCCAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532839.3
ncRNA:24   UCCGAAUGUCUAACAGGUUAGGUA   1
  ***=|||||*||||*|||||||||
targets:4   CAAUUUACAAAUUGCCCAAUCCAU   27

2.5 PREDICTED: Glycine max uncharacterized LOC100781082 (LOC100781082), mRNA uncharacterized LOC100781082(LOC100781082) coding protein psRNATarget