ncRNA ID | novel_gma_miR1414 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:42811290-42811384 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451644 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGAAAUUCAUGUGGAUCUCA - 21 |
Stem-loop(if miRNA) |
--UU                   ----    UU    AA AAAA   GCC     GAAAUUCAUGUGGAUCUCA    AUAU  UGGG  U    UCU   A     |||||||||||||||||||    ||||  ||||  |    |||     CUUUAAGUACACCUAGAGU    UAUA  ACCC  A    AGA   U CCCG                   AAUU    -C    AG GUAA   GUA |
Stem-loop sequence | UUGAAAUUCAUGUGGAUCUCAAUAUUUUGGGAAUAAAAUCUGCCAUAUGAGAAAUGAGACCCACAUAUUUAAUGAGAUCCACAUGAAUUUCGCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003549005.3 |
|
2.5 | PREDICTED: Glycine max DELLA protein RGL1-like (LOC100775374), mRNA | DELLA protein RGL1-like(LOC100775374) | coding protein | psRNATarget | |||||||||
XM_014777550.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC106799354 (LOC106799354), mRNA | uncharacterized LOC106799354(LOC106799354) | coding protein | psRNATarget | |||||||||
XM_006577571.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102669566 (LOC102669566), mRNA | uncharacterized LOC102669566(LOC102669566) | coding protein | psRNATarget |