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BaseInfo

ncRNA ID novel_gma_miR1414
Species Glycine max
Class miRNA
Genome position Chr4:42811290-42811384 [+]
Reference genome Glycine_max_v2.0
Source SRR1451644
Length 21
Mature sequence(if miRNA) 1 - UUGAAAUUCAUGUGGAUCUCA - 21
Stem-loop(if miRNA) --UU                   ----    UU    AA AAAA   GCC
    GAAAUUCAUGUGGAUCUCA    AUAU  UGGG  U    UCU   A
    |||||||||||||||||||    ||||  ||||  |    |||
    CUUUAAGUACACCUAGAGU    UAUA  ACCC  A    AGA   U
CCCG                   AAUU    -C    AG GUAA   GUA
Stem-loop sequence UUGAAAUUCAUGUGGAUCUCAAUAUUUUGGGAAUAAAAUCUGCCAUAUGAGAAAUGAGACCCACAUAUUUAAUGAGAUCCACAUGAAUUUCGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003549005.3
ncRNA:21   ACUCUAGGUGUACUUAAAGUU   1
  ||||||=|||||*||||||||
targets:2443   UGAGAUUCACAUAAAUUUCAA   2463

2.5 PREDICTED: Glycine max DELLA protein RGL1-like (LOC100775374), mRNA DELLA protein RGL1-like(LOC100775374) coding protein psRNATarget
XM_014777550.1
ncRNA:21   ACUCUAGGUGUACUUAAAGUU   1
  |*|*||||||||||*||||||
targets:743   UCAUAUCCACAUGAUUUUCAA   763

2.5 PREDICTED: Glycine max uncharacterized LOC106799354 (LOC106799354), mRNA uncharacterized LOC106799354(LOC106799354) coding protein psRNATarget
XM_006577571.2
ncRNA:21   ACUCUAGGUGUACUUAAAGUU   1
  |*|*||||||||||*||||||
targets:792   UCAUAUCCACAUGAUUUUCAA   812

2.5 PREDICTED: Glycine max uncharacterized LOC102669566 (LOC102669566), mRNA uncharacterized LOC102669566(LOC102669566) coding protein psRNATarget