ncRNA ID | novel_gma_miR1412 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:38535280-38535394 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451644 |
Length | 21 |
Mature sequence(if miRNA) | 95 - UUUUUAUGUUGAUUCUACACU - 115 |
Stem-loop(if miRNA) |
--G   U        UC       UU          CCAUCCACCAUCAAAG    U        C    GUA GGAUCAAC  AAAAAGG  AUCGUGCUUA                AAAU UUAUAUCU U    ||| ||||||||  |||||||  ||||||||||                |||| ||||||||    CAU CUUAGUUG  UUUUUUU  UAGUACGAGU                UUUA AGUGUAGG A UCA   -        UA       --          --------------AA    C        U |
Stem-loop sequence | GGUAUGGAUCAACUCAAAAAGGUUAUCGUGCUUACCAUCCACCAUCAAAGAAAUUUUAUAUCUCUAUGGAUGUGACAUUUAAUGAGCAUGAUUUUUUUUAUGUUGAUUCUACACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006581438.2 |
|
3.0 | PREDICTED: Glycine max zinc-finger homeodomain protein 2-like (LOC100820567), transcript variant X2, mRNA | zinc-finger homeodomain protein 2-like(LOC100820567) | coding protein | psRNATarget | |||||||||
XM_003526491.3 |
|
3.0 | PREDICTED: Glycine max zinc-finger homeodomain protein 2-like (LOC100820567), transcript variant X1, mRNA | zinc-finger homeodomain protein 2-like(LOC100820567) | coding protein | psRNATarget |