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BaseInfo

ncRNA ID novel_gma_miR1412
Species Glycine max
Class miRNA
Genome position Chr4:38535280-38535394 [+]
Reference genome Glycine_max_v2.0
Source SRR1451644
Length 21
Mature sequence(if miRNA) 95 - UUUUUAUGUUGAUUCUACACU - 115
Stem-loop(if miRNA) --G   U        UC       UU          CCAUCCACCAUCAAAG    U        C
   GUA GGAUCAAC  AAAAAGG  AUCGUGCUUA                AAAU UUAUAUCU U
   ||| ||||||||  |||||||  ||||||||||                |||| ||||||||
   CAU CUUAGUUG  UUUUUUU  UAGUACGAGU                UUUA AGUGUAGG A
UCA   -        UA       --          --------------AA    C        U
Stem-loop sequence GGUAUGGAUCAACUCAAAAAGGUUAUCGUGCUUACCAUCCACCAUCAAAGAAAUUUUAUAUCUCUAUGGAUGUGACAUUUAAUGAGCAUGAUUUUUUUUAUGUUGAUUCUACACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006581438.2
ncRNA:21   UCACAUCUUAGUUGUAUUUUU   1
  ****||||||||||||||||*
targets:104   UUAUUAGAAUCAACAUAAAAU   124

3.0 PREDICTED: Glycine max zinc-finger homeodomain protein 2-like (LOC100820567), transcript variant X2, mRNA zinc-finger homeodomain protein 2-like(LOC100820567) coding protein psRNATarget
XM_003526491.3
ncRNA:21   UCACAUCUUAGUUGUAUUUUU   1
  ****||||||||||||||||*
targets:82   UUAUUAGAAUCAACAUAAAAU   102

3.0 PREDICTED: Glycine max zinc-finger homeodomain protein 2-like (LOC100820567), transcript variant X1, mRNA zinc-finger homeodomain protein 2-like(LOC100820567) coding protein psRNATarget