ncRNA ID | novel_gma_miR1395 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:13216922-13217029 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451644 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACAUGCAAACCAACCAACAAA - 21 |
Stem-loop(if miRNA) |
--ACA                     C  CU         ------G      UUCA      UGCAAACCAACCAACAAAUCU UA  AAGUAGGGA       UCCCUA    A      ||||||||||||||||||||| ||  |||||||||       ||||||      ACGUUUGGUUGGUUGUUUAGA AU  UUCAUCCCU       AGGGGU    A UUCGC                     A  UC         AAACGGA      UAAA |
Stem-loop sequence | ACAUGCAAACCAACCAACAAAUCUCUACUAAGUAGGGAGUCCCUAUUCAAAAAAUUGGGGAAGGCAAAUCCCUACUUCUUAAAGAUUUGUUGGUUGGUUUGCACGCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001250162.2 |
|
2.0 | Glycine max uncharacterized LOC100499864 (LOC100499864), mRNA | uncharacterized LOC100499864(LOC100499864) | coding protein | psRNATarget | |||||||||
BT089887.1 |
|
2.0 | Soybean clone JCVI-FLGm-3G11 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
AK244428.1 |
|
2.0 | Glycine max cDNA, clone: GMFL01-02-P18 | NA | coding protein | psRNATarget | |||||||||
AK285898.1 |
|
2.0 | Glycine max cDNA, clone: GMFL01-18-D14 | NA | coding protein | psRNATarget |