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BaseInfo

ncRNA ID novel_gma_miR1395
Species Glycine max
Class miRNA
Genome position Chr17:13216922-13217029 [+]
Reference genome Glycine_max_v2.0
Source SRR1451644
Length 21
Mature sequence(if miRNA) 1 - ACAUGCAAACCAACCAACAAA - 21
Stem-loop(if miRNA) --ACA                     C  CU         ------G      UUCA
     UGCAAACCAACCAACAAAUCU UA  AAGUAGGGA       UCCCUA    A
     ||||||||||||||||||||| ||  |||||||||       ||||||
     ACGUUUGGUUGGUUGUUUAGA AU  UUCAUCCCU       AGGGGU    A
UUCGC                     A  UC         AAACGGA      UAAA
Stem-loop sequence ACAUGCAAACCAACCAACAAAUCUCUACUAAGUAGGGAGUCCCUAUUCAAAAAAUUGGGGAAGGCAAAUCCCUACUUCUUAAAGAUUUGUUGGUUGGUUUGCACGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001250162.2
ncRNA:21   AAACAACCAACCAAACGUACA   1
  **|||*|*|||||||||||||
targets:554   CAUGUAGCUUGGUUUGCAUGU   574

2.0 Glycine max uncharacterized LOC100499864 (LOC100499864), mRNA uncharacterized LOC100499864(LOC100499864) coding protein psRNATarget
BT089887.1
ncRNA:21   AAACAACCAACCAAACGUACA   1
  **|||*|*|||||||||||||
targets:556   CAUGUAGCUUGGUUUGCAUGU   576

2.0 Soybean clone JCVI-FLGm-3G11 unknown mRNA NA coding protein psRNATarget
AK244428.1
ncRNA:21   AAACAACCAACCAAACGUACA   1
  **|||*|*|||||||||||||
targets:553   CAUGUAGCUUGGUUUGCAUGU   573

2.0 Glycine max cDNA, clone: GMFL01-02-P18 NA coding protein psRNATarget
AK285898.1
ncRNA:21   AAACAACCAACCAAACGUACA   1
  **|||*|*|||||||||||||
targets:596   CAUGUAGCUUGGUUUGCAUGU   616

2.0 Glycine max cDNA, clone: GMFL01-18-D14 NA coding protein psRNATarget